Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0870 ATGGAAGATGATGGGACGATATGCAACACAAGGCTGAGTCTAGGGCTTGGAATAGGAAGCTATGTGATGCCATTAAAGAAGCAGAAGTTTGAAGAAGCCATTATTAATAAAGAATTGATCAGTTTGAAGACCAGAATTGATGATGAAGAAGAAGATGAAAAAAGCGATCATAGATATACTTGCAGAAAGAAACTGAGACTCACCAAGGAACAATCCGCCATGCTTGAAGATAGCTTTAAGCTCCATAGCTCTCTCAACCCACTCCAAAAACAAGAACTTGCTCAGCGATTGAATCTGAAGCCCAGACAGATCGAAGTTTGGTTTCAAAACAGAAGAGCGAGGAAAAAGTTGAAGCAAACGGAAATAGACTGCGAGTTGCTGAGAAAATGCTGCGAAAACCTAAGAAAGGAGAACAGAAGGTTGAAGATGGAAGTAGAGGAACTACGCGGCGGCCTGAAAGTTGAAGCGCCGTCGTCTTCGTCGTCACCACCACCGTTGATATTAGGAAGCGGTAATAACAGTACTCAACTGTCAAGAGCAGCAGCCACACTGGCTCTGTGCTCCTCTTGTGAGAAGCCATTAATCAAAGGCCATTGA 597 0.4355 MEDDGTICNTRLSLGLGIGSYVMPLKKQKFEEAIINKELISLKTRIDDEEEDEKSDHRYTCRKKLRLTKEQSAMLEDSFKLHSSLNPLQKQELAQRLNLKPRQIEVWFQNRRARKKLKQTEIDCELLRKCCENLRKENRRLKMEVEELRGGLKVEAPSSSSSPPPLILGSGNNSTQLSRAAATLALCSSCEKPLIKGH 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0870 198 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 43 192 - -
Alju13g0870 198 Pfam Homeobox associated leucine zipper 118 151 IPR003106 GO:0006355|GO:0043565
Alju13g0870 198 CDD homeodomain 62 119 IPR001356 GO:0003677
Alju13g0870 198 Pfam Homeodomain 62 116 IPR001356 GO:0003677
Alju13g0870 198 SUPERFAMILY Homeodomain-like 55 119 IPR009057 -
Alju13g0870 198 Gene3D - 54 123 - -
Alju13g0870 198 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Alju13g0870 198 SMART HOX_1 60 122 IPR001356 GO:0003677
Alju13g0870 198 SMART halz 118 162 IPR003106 GO:0006355|GO:0043565
Alju13g0870 198 Coils Coil 117 151 - -
Alju13g0870 198 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0870 Alju-ChrAlju13 26209390 26210997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0870 44 192 Homeobox Transcription Factor Family AT4G37790 54.362 5.21e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju13g0870 Homeodomain 3.7e-16 CL0123