Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0868 ATGCTTCAAAGTGCCAGAGCTGTCATCTTTGTTCTTGAACCAATGAAAGCTAATAGCGGTCTCCCTCTTACAATATATTATTCTTGTGACTTAGATAGCGAAATTGAGAAGAAAAGGCTGTGTCTAGGTAATTTTTTTGGCTGTTTCTATTCGTCTCCATTTGCCCTCATGGTTGATGAACCTTCTCAAAGCTTCATTCCCTACCCCAGAATGCCTCGCCGAGTAATCGAAGTGGAATCTCCTTCATCCACTCAGAATATTCAGGCATCATCCCTACAAAATTCTGAAGGATTGTTCTTTTTCTTTGGAGGGATAGTAATGCTCATCATATTGCTGATTCTTGTATTTGTGTTTCGGAGTCACATTAAACCAGCAAAACTAATGAACATGATAGCTTGGAATAAACAGCAGCCTCCGAAGAAACAGCAACAAGCATCAGCAGAGGTGGTGGAGATGATAGTTTCAACAACAACAAATAAGCTGCAAGGATCCATGGAACTCCTGAGCGGGAACCTTCGAACAATTATCTACTTTGACTACTGGACATTGAAGAAGGCAACCAAGAATTTTCATTCTGGTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCAAATGGGAGGCTAATTGCAGTCAAGAAACTGTCTCTTAACAAATCCAATCAAGGAGAGAAAGAATTTCTAGCAGAGGTGAGAATGATTACCAGTATTCAACACAAAAATCTGGTTCGCCTTATTGGATGCTGCACAGAAGGGATAGAAAGGATACTCGTGTATGAATACATGAGGAACAAAAGTTTGGACCTCTATATATATGGAAACAGTGGTCAATTTCTAGATTGGAGAACTAGGTTCCAGATTATTCTTGGAATAGCACGTGGATTGCAATATTTACACGAGGATTCACACATCAGAATTGTCCATCGAGATATTAAAGCAAGCAACATTCTTCTTGATGAAAAGTTTCATCCGAGGATTGGAGACTTTGGATTGGCAAGATTCTTCCCTGAAGACGAAGATTACCTCAGCACTCAGTTTGCTGGAACATTAGGTTATACGGCTCCTGAATATGCTATTAGAGGGGAATTGACAGAAAAGGCAGACATCTACAGTTTTGGAGTCCTTGTGCTTGAAATTATTTGTGGCAGGAAAAATACGGACCTTACTTTACCATCAGACATGCAGTATCTTCCTGAATATGCCTGGAAGCTCTTTGATAAGTCAAGATTGATGGATCTTGTAGACCCAAAATTGCAGGAACTTGGATTTACAGAAAAGGATGTTATGCAAGCAATCCATGTGGCATTCTTATGTATTCAGTCTCAAGCAAACTTAAGGCCTCCAATGTCAGAGATTGTAGCATTGTTGACATTCAAAATTGACATGGTTAGAACACCGATGAGACCGTCCTTCCTTGGCCGAAGGCAGAGAAAGGATGATGAGTGCCATTCTTGGGAAGCCGTGTCTGAGGCATATCCTTCACCATTGCCCAGTGATTCTTCATCCATACCAAAATCCTCTAAATCTCTTCGCCTTGGTGTTGCATTGGTTTTGTTTCAGACATCACAAGCAGAAGCAACCCTCTTTCTTCTTTTGACCTATGGACTGAATCTACGCAACCCCCCATCCATATCTTTTGTATTCAGCATAGGGACAAGTCTCTTATTGTCTGAGATGGAGGTGTTCTTCATGGAGCTTGAAAAGGAATGGCTAAAATGGCAGCTCTTGGAGTTGCACTTGTTGGCATCTTCTTCTTCGTCTTCTTCTTCATGTTCATTTGAGCTCTTCTTCTCTGTAACTTCAATAAAGGTCTTGTTTCTTGCAGATACTGTGTTGTTGGACCTATGGCAAATCAATATCAAAAGACACACCAAAAATATCAATCTCATTGATCCAAGTTCAAGCTCAAAACAAAACATAGAAGAAATGAAGGGCAGAGAAAAAGAGAGAGACCCACAGAAGATTATATACTTGTAA 1992 0.4051 MLQSARAVIFVLEPMKANSGLPLTIYYSCDLDSEIEKKRLCLGNFFGCFYSSPFALMVDEPSQSFIPYPRMPRRVIEVESPSSTQNIQASSLQNSEGLFFFFGGIVMLIILLILVFVFRSHIKPAKLMNMIAWNKQQPPKKQQQASAEVVEMIVSTTTNKLQGSMELLSGNLRTIIYFDYWTLKKATKNFHSGNLLGSGGFGPVYRGKLANGRLIAVKKLSLNKSNQGEKEFLAEVRMITSIQHKNLVRLIGCCTEGIERILVYEYMRNKSLDLYIYGNSGQFLDWRTRFQIILGIARGLQYLHEDSHIRIVHRDIKASNILLDEKFHPRIGDFGLARFFPEDEDYLSTQFAGTLGYTAPEYAIRGELTEKADIYSFGVLVLEIICGRKNTDLTLPSDMQYLPEYAWKLFDKSRLMDLVDPKLQELGFTEKDVMQAIHVAFLCIQSQANLRPPMSEIVALLTFKIDMVRTPMRPSFLGRRQRKDDECHSWEAVSEAYPSPLPSDSSSIPKSSKSLRLGVALVLFQTSQAEATLFLLLTYGLNLRNPPSISFVFSIGTSLLLSEMEVFFMELEKEWLKWQLLELHLLASSSSSSSSCSFELFFSVTSIKVLFLADTVLLDLWQINIKRHTKNINLIDPSSSSKQNIEEMKGREKERDPQKIIYL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0868 663 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 267 471 - -
Alju13g0868 663 Gene3D Transferase(Phosphotransferase) domain 1 267 469 - -
Alju13g0868 663 ProSiteProfiles Protein kinase domain profile. 190 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0868 663 FunFam Cysteine-rich receptor-like protein kinase 10 154 266 - -
Alju13g0868 663 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 489 - -
Alju13g0868 663 Pfam Protein tyrosine and serine/threonine kinase 192 460 IPR001245 GO:0004672|GO:0006468
Alju13g0868 663 Gene3D Phosphorylase Kinase; domain 1 149 266 - -
Alju13g0868 663 SMART serkin_6 190 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0868 663 CDD STKc_IRAK 196 462 - -
Alju13g0868 663 SUPERFAMILY Protein kinase-like (PK-like) 172 464 IPR011009 -
Alju13g0868 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0868 Alju-ChrAlju13 26184511 26192286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0868 147 477 Receptor kinase-like Gene Family AT1G56120 47.130 3.52e-100 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju13g0868 PK_Tyr_Ser-Thr 3.5e-47 CL0016