Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0867 ATGACCAACCACAACTATAACCCCATCATCATGATTGGCTTTCTCTTCGTCAGCGTCCTCGCCGCCTCCGCCGCCGGCAACTTCAACCAGGACTTCCAAATCACATGGGGCGACGGCCGCGGCAAGGTCCTCGACGGCGGTCACCTTCTCACCCTCTCCCTCGACAAGAGCTCCGGCTCCGGCTTCCGCTCCGTCAATGAATACCTCTTCGCAAAGATAGACATGCAGCTCAAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCACCACTTACTATCTAAGTTCAGAGGGGTCAAGTCATGATGAAATAGACTTTGAATTTCTGGGGAATTTGAGTGGTGATCCATATACTCTTCATACCAACATATATGCACAGGGAAAAGGTAACAGAGAGCAGCAATTTCACTTGTGGTTTGATCCCACCAACGACTTTCACACTTATTCTATTCTCTGGAATCCTCAAACCATCATATTCTCAGTGGATGGGAGACCAATAAGGGAATACAAGAACATGGAATCAAGAGGGATCCCATTTCCAAAGAGCCAAGCAATGAGAATATACGGAAGCCTTTGGGATGCTGAGGATTGGGCCACCAGAGGAGGACTTGTCAAGACTGATTGGGCCCAAGCTCCCTTCACCGCCTCTTTCAGAGGCTTCGCCGCCCAAGCCGGCGGTGGATCCGGCGACCAGTCGTGGCTGAAACAGTCGCTGGACGCGGCGGGGCAAGCAAGTATCAAGGAGGTACAGCAGAAGTATATGATATATAATTATTGTACTGATACAAAGCGATTCCCTCAGGGGGTCCCACCTGAATGCTCTCCCTGA 825 0.5164 MTNHNYNPIIMIGFLFVSVLAASAAGNFNQDFQITWGDGRGKVLDGGHLLTLSLDKSSGSGFRSVNEYLFAKIDMQLKLVPGNSAGTVTTYYLSSEGSSHDEIDFEFLGNLSGDPYTLHTNIYAQGKGNREQQFHLWFDPTNDFHTYSILWNPQTIIFSVDGRPIREYKNMESRGIPFPKSQAMRIYGSLWDAEDWATRGGLVKTDWAQAPFTASFRGFAAQAGGGSGDQSWLKQSLDAAGQASIKEVQQKYMIYNYCTDTKRFPQGVPPECSP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0867 274 Pfam Glycosyl hydrolases family 16 29 208 IPR000757 GO:0004553|GO:0005975
Alju13g0867 274 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 273 IPR013320 -
Alju13g0867 274 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 25 272 IPR044791 GO:0004553
Alju13g0867 274 Gene3D - 14 274 - -
Alju13g0867 274 CDD GH16_XET 24 272 IPR016455 GO:0010411|GO:0016762|GO:0042546
Alju13g0867 274 FunFam Xyloglucan endotransglucosylase/hydrolase 15 274 - -
Alju13g0867 274 PIRSF EndGlu_transf 2 274 IPR016455 GO:0010411|GO:0016762|GO:0042546
Alju13g0867 274 ProSitePatterns Glycosyl hydrolases family 16 active sites. 102 112 IPR008263 GO:0004553|GO:0005975
Alju13g0867 274 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 216 IPR000757 GO:0004553|GO:0005975
Alju13g0867 274 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 229 272 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0867 Alju-ChrAlju13 26167358 26169544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0867 1 272 Glycoside Hydrolase AT4G25810 65.614 3.50e-139 391