Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0854 ATGGCTCCGAGAATCTTACTATGCGGCGACGTCATGGGCCGCCTCAACCAGCTCTTCAAGCGTGTTTCCTCTGTCAATAAATCGGCTGGTCCATTCGATGCGCTTTTCTGCGTGGGTCAATTCTTCCCGGAATCTCCTGACCAGCTGGACGAGTTCATGGACTACATTGAGGGTCGAACGCAGGTTCCTCTTCCGACTTACTTCATCGGCGACTTTGGCGTCGGTGCGCCTAAAGTTTTATTAGCAGCCTCTAAGGACCCGGAAAACCGTGGCTTCAAGATGGATGGCTTGAGGGTTTGCGATAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCACTCTCTTGGGGTTATCTGTGGCCTATTTATCTGGCAGACAATCACCAGATGCTCAACAGTATGGAGTTTACAGTCAAGATGATGTTGATGCTTTGAGAGCAATAGCTGAGGAACCTGGAATAGTGGACTTTGGGGTCACAAATAGAGCAAATACTTCAGACATTCCTGCTGGACTATCGGATTCCATGGGGAGTGATTCAATCATAGCAGAGTTGGTGGGAGAGATTAAACCACGTTATCACATTGCAGGCAGTAAATGCATATACTATGCCCGTGAACCTTATTCTAATATTGAAGCAGTGCATGTGACTCGTTTCATAGGGCTTGCTACTGTTGGAAATAAAGATAAGAAGAAATTTATTCATGCAATTTCTCCCACGCCTGCATCCACCATGTCCTCAACCGATATTGCCATGAAAACCACTAATACCACCTTATCGCCTTATACATTGGTGGAGAAAAGAACTTCTCCAGAGGACACTGCAAAGAGATCCAGTGATAGTGTCTCTGATTCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACGGAAACATGGAGCTGGAGATGGTGATAAATTGTGTTTTAAATTTTTGTCTTCTGGTTCTTGTCCAAGGGGAGAAAAGTGCAATTTTCGACATGATTTAGATGCAAGGGAGCAGTATATTAGAGGGGTTTGTTTTGATTTTTTAAACAAAGGGAAATGTGAAAGAGGTCCTGATTGCAACTTTAAGCACAGCTTGCAGGATGAAGGGGAGAATGATTCTGACAGGAGACCAAGATCTCAAAATTTTAGCTCTAACAGATCAAAAGAGTGCTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTGATCGCTAGCATTGGAGAAAATTACTATTGTGCATTGGCTAAAGGCCCACTTGTTGAAGACCATGTGCTACTAATACCAGTTGAGCATTTGCCAAGTACATTATCACTGTCAACGGAATCTGAAGTTGAGCTTAGTAAATTCCAGAACAGTCTAAGGATGTACCACAAGAATCAAGGAAAGCAAGTAATCTTCTTTGAGTGGGTTTCCATACGTACTAGTCATGCCAATCTTCAGGTTGTTCCTATTCCAACTTCCAAAGCAACACTGGTTGAAAAAATATTCAATTTAGCAGCAGAAAAGCTGGGATTTAAATTTGGGTCTAAGAAATTTGATAGCGATTCTGATGGAAGAAAATTTTTGAGGGCACAATTTGATGGGAATTCAAGTTTGTTCTATGTTGAACTACCAGGAAGTGCAATATTGTTGCATCAGGTTGAAGATAATGAGAAATTTCCTGCCCAATTTGGTCGTGAGGTTGTATCAGGCTTGCTTAATATGGCGGATAAGGCAGATTGGAGGAATTGCAAATATAGCAAGGAGGAAGAAACAAAAATGGTTCAAGATTTTAAGAGCCGATTTCAAGAATTCGATCCAAACTGCTGA 1797 0.4207 MAPRILLCGDVMGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPESPDQLDEFMDYIEGRTQVPLPTYFIGDFGVGAPKVLLAASKDPENRGFKMDGLRVCDNLYWLKGSGKFTLLGLSVAYLSGRQSPDAQQYGVYSQDDVDALRAIAEEPGIVDFGVTNRANTSDIPAGLSDSMGSDSIIAELVGEIKPRYHIAGSKCIYYAREPYSNIEAVHVTRFIGLATVGNKDKKKFIHAISPTPASTMSSTDIAMKTTNTTLSPYTLVEKRTSPEDTAKRSSDSVSDSQYWRYDVSQKRRKHGAGDGDKLCFKFLSSGSCPRGEKCNFRHDLDAREQYIRGVCFDFLNKGKCERGPDCNFKHSLQDEGENDSDRRPRSQNFSSNRSKECWFCLSSPNVESHLIASIGENYYCALAKGPLVEDHVLLIPVEHLPSTLSLSTESEVELSKFQNSLRMYHKNQGKQVIFFEWVSIRTSHANLQVVPIPTSKATLVEKIFNLAAEKLGFKFGSKKFDSDSDGRKFLRAQFDGNSSLFYVELPGSAILLHQVEDNEKFPAQFGREVVSGLLNMADKADWRNCKYSKEEETKMVQDFKSRFQEFDPNC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0854 598 Pfam Protein similar to CwfJ C-terminus 2 516 595 IPR006767 -
Alju13g0854 598 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 597 IPR040194 -
Alju13g0854 598 MobiDBLite consensus disorder prediction 359 378 - -
Alju13g0854 598 Gene3D - 379 499 IPR036265 -
Alju13g0854 598 Pfam Protein similar to CwfJ C-terminus 1 378 492 IPR006768 -
Alju13g0854 598 ProSiteProfiles Zinc finger C3H1-type profile. 301 329 IPR000571 GO:0046872
Alju13g0854 598 ProSiteProfiles Zinc finger C3H1-type profile. 333 361 IPR000571 GO:0046872
Alju13g0854 598 SMART c3hfinal6 335 360 IPR000571 GO:0046872
Alju13g0854 598 SMART c3hfinal6 303 328 IPR000571 GO:0046872
Alju13g0854 598 SUPERFAMILY CCCH zinc finger 305 330 IPR036855 GO:0046872
Alju13g0854 598 CDD MPP_CWF19_N 6 224 - -
Alju13g0854 598 MobiDBLite consensus disorder prediction 359 377 - -
Alju13g0854 598 FunFam Zinc finger CCCH domain-containing protein 59 361 487 - -
Alju13g0854 598 Gene3D - 290 361 - -
Alju13g0854 598 SUPERFAMILY CCCH zinc finger 336 362 IPR036855 GO:0046872
Alju13g0854 598 MobiDBLite consensus disorder prediction 260 279 - -
Alju13g0854 598 SUPERFAMILY HIT-like 383 480 IPR036265 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju13g0854 CwfJ_C_1 2.8e-37 CL0265