LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g0837	ATGTCGTTGGTGATGATGATGATGATGCAGGTACTGCTCATGAATCTGGGGAATGCTCAGAACCAGTGTGTCCCGTTCCGTCTCGTTCCAGCCAAACTTGATAGAAGCAATCCCACTACTAATTTTTATCCCTGTTCTGATTCCCTTCCTACAACTGACAATGTGGAGATGGTTGAGTTCCCAGGAGTACCAGCTCTTGAACGACTTAGACTTGCCGTAGTATCAAAAGACTACAAGTCCCACATCTTAGAATTATGTGACCTTGGAGGTTGTCTTACCCAACTCTATTTAATACTTCTTAATTCATCCATTTATCCTTTCCAATTGGAATCATCAAATAAAACTACTTCTAGTGTTATCTTTTTCAATTGTTCCTCAGTTGGGTCGAAATACTTGAAAAATGATGAATATTCCTCCTTCACCCCACAAGACATGCATGTTTGCCCAATTTATGCTGTTGGCTCCAACGAAGGTATCCTGAAGAATGACGTAGCCTTTTGCACCAAGATGTTTCAGTTGGATTCACCATTCGACCCAGATGATCTTCGGTCGAACGTGTTTCGATTAAGATGGTCCCAACCCAAATGTGATGTTGAAAACAGCAAGCCAAATGTATTCAAATATGTTTTACCAGCTGCAGGTTCGATTTTGTTAGTATTGTGCGTTGTGTTGCTTCTACTAACATATCGCTACTTCAAAACAAAAGGAGATGATCAAGCAAGACTTGAAAAGTTTTTGAAGGATTATGAAGCCCTCAAGCCAACAAGATTTTCATATGCTGATCTCAAAAGAATGACAAACAATTTCAAGGACAAAATAGGGGAAGGAGCTCATGGATTAGTATTCAAAGGTAAGCTATCCAATCAGATTATAGTAGCTGTGAAGGTACTCAATAACTCTGATGATGACGATGGTAAGGACTTCATTAATGAAGTTGGGACTATGGGAGGAGACATAAATATTCACATTGAAGATGAAGATGACAATAGAATCGCTAGGAAACTAGCAATTGTGGGACTCTGGTGCATCCAGTGGCATCCAATCAGCCGTCCATCCATGAAAACAGTGATACAAATGTTAGGAGGAGAAGGTGATGAATTAAAGATGCCCCCGATTCAAGTTGACTCCATAAATACCACGAATACAAGGATCAATAATCCAGCAAGACATTTGAATTTGGGGTTAGAAATTATTCATGAATTAGAATAA	1209	0.3945	MSLVMMMMMQVLLMNLGNAQNQCVPFRLVPAKLDRSNPTTNFYPCSDSLPTTDNVEMVEFPGVPALERLRLAVVSKDYKSHILELCDLGGCLTQLYLILLNSSIYPFQLESSNKTTSSVIFFNCSSVGSKYLKNDEYSSFTPQDMHVCPIYAVGSNEGILKNDVAFCTKMFQLDSPFDPDDLRSNVFRLRWSQPKCDVENSKPNVFKYVLPAAGSILLVLCVVLLLLTYRYFKTKGDDQARLEKFLKDYEALKPTRFSYADLKRMTNNFKDKIGEGAHGLVFKGKLSNQIIVAVKVLNNSDDDDGKDFINEVGTMGGDINIHIEDEDDNRIARKLAIVGLWCIQWHPISRPSMKTVIQMLGGEGDELKMPPIQVDSINTTNTRINNPARHLNLGLEIIHELE	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g0837	402	Gene3D	Phosphorylase Kinase; domain 1	242	320	-	-
	Alju13g0837	402	PANTHER	OS07G0415500 PROTEIN	98	316	-	-
	Alju13g0837	402	SUPERFAMILY	Protein kinase-like (PK-like)	251	315	IPR011009	-
	Alju13g0837	402	ProSitePatterns	Protein kinases ATP-binding region signature.	273	295	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g0837	Alju-ChrAlju13	25817082	25818925	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g0837	322	371	Receptor kinase-like Gene Family	AT1G66980	43.396	1.32e-09	58.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Alju13g0837		None	None	None