Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0836 ATGAGCAGAGAGAAAATAGACTTAATCAGGTTATGGAGTCTATTGTTGTTCACTCTTGTGCATCTAACACCCCAAACAGTTATGAGTTCTAAGGATGAGACTAAAACCTGTAATCCGTCTCGTTGCGGCATCATCACAAACATCTCATACCCATTTCGTCTCCGAGACGACCCACCCAACTGCGGCCTCCGGCCTTTCGAGTTAGCCTGTGAAAACAGTGTCGCTTTGCTTCATCTGCATTTAGGAACACCAAATCCAACATACCAAGTTCTGGGAATCAACTACGACAACTACACAATCCGACTCAGAGATCCCGGCATTCGGGAGGGTGATTGCTCCTCCCTCCCTCGTTATTTCTTATCCAAATCCAATTTCAGTGACACTTATGATCAACACTACGAATATGATAGCAACAAAAATCCATATGTTGCCTCTCTGGGACCAGCACCCTATTCAAAACTTACGTTCGACCACGTCATTTACCTGAAGTGCAGTGATCCAGTGAGGGACGACGCAGGGTATGTGGATACGACTGCCTGCGTGGGTTGGAGATCCAACGGAGGAGAAGGATACCACGTGTATGCTGTTGTTGGAGACTTGGAGGCTGGCAGGTTGAAACCTGAGTGTCGTGTGAAATCTGTGGCCACCATTGATTCAGATTGGAGATCATTCCTAAAGGGGAAGAGCTTCCCGTACGGTGATATTCACAGATTACTTTCCCTTGGTTTTGAGCTTTCATGGTGGGAACAAGCTTGTTTGGATCATCATTGTGCAAAGTACGAGTATTGCTTCTTCAACGATAGTTCCACGCCAAAGGTCTCCTGCTCAGAAAAAACGAGTAGCTGTTACAATACCAAAAGAGTATTCTTTCCTCTCTTTTGTGGAAATATGGCAGATCTGAACCATCGTGTAGAAGCATTTCTCGTTGGCATTCTCTCAGGATTGCCATCCTCTAAGGATATTCGTCAACTTGCAGAATTTGCGTACGGGTCGATAGAGTCCGACTCTGGTGAAAAATATGCTGGTGATTTAATTTCAATACCAGTTGCATTCACCTTAGGAAAAATCACAGCATATGTTTCTACAGCCATTATTATAAGATTTCTGGTTGGTACATTATTGCTCTTCATCTTGTTGATTTACACATATCGGAGAAGACACCTATCAATGTATGAAAGTATTGAGGATTTCATAAGACTTCATGACCTTCATCCAATAAGGTACTCCTACAAGGATTTAAATACTATGACTAAAGGTTTCAAGGATAAGATTGGTGAAGGAGGCTTCGCCACTATATACAAAGGCAAGTTAAGGAGTGGATATGATGTTGCCGTTAAAATGTTGGATAAATCCAAAGCCACAAGCCAAGAATTTATCAACGAAGTGGCAACTATAGGAAGGATACATCATTTCAATGTGGCTCGTCTGGTTGGTTTTTGTGTGGAAGGAACGAAACGTGCTCTTATATATGAATTCATGTCCAATGGATCTTTAGATAAGCATATTTTCCTTAAAGAAGGAAGTGTCTCCTTGAGTTATCGTAGAATATATGAGATATCCTTAGGAGTGGCCCGTGGTGTTGCTTATCTTCATCATGGCTGTGACATGCAAATATTGCACTTTGATATCAAGCCGCAAAATGTTCTTCTTGATGACAACTTGACCCCAAAAATTTCAGATTTTGGACTTGCGAGGTTGTATTTTACTAATGATAGCATCTCCACTTTGACTGCGGCAAGAGGAACACTAGGGTACATGGCTCCTGAATTATACTATAAGAATATTGGGAAAGTGTCCCATAAATCCGATGTTTACAGTTTTGGAATGCTTTTGATGGAGACGGCAAGCCGAAGAAGGAATTTGAACCCACATGTAGAACATTCAAGCCAACTTTATTTTCCCTTGTGGATTTATGACCAATTTGATAAAGAGAATGACATAGAAATGGAGGATTTCACAGAAGAGGAAAAGGTTTTGGCAAAGAAAATGTTTATAGTAGCATTATGGTGCATTCAATTTAATCCTGCTGATCGCCCTTCAATGAACAAAGTAATTGAGATGTTGGAAGCGGATGATGTTAGAAGTCTTGAAATGCCTCCAAAACCTTCTATATATCCTGAAAATGACCAATCCAACTTTGACCAGACAACATCTTCAATGTTCTCCCAAAGTTCTCATGGCGATCTAGGTGATGAGGATGCAAGGGACAGCACTTATTAA 2220 0.4131 MSREKIDLIRLWSLLLFTLVHLTPQTVMSSKDETKTCNPSRCGIITNISYPFRLRDDPPNCGLRPFELACENSVALLHLHLGTPNPTYQVLGINYDNYTIRLRDPGIREGDCSSLPRYFLSKSNFSDTYDQHYEYDSNKNPYVASLGPAPYSKLTFDHVIYLKCSDPVRDDAGYVDTTACVGWRSNGGEGYHVYAVVGDLEAGRLKPECRVKSVATIDSDWRSFLKGKSFPYGDIHRLLSLGFELSWWEQACLDHHCAKYEYCFFNDSSTPKVSCSEKTSSCYNTKRVFFPLFCGNMADLNHRVEAFLVGILSGLPSSKDIRQLAEFAYGSIESDSGEKYAGDLISIPVAFTLGKITAYVSTAIIIRFLVGTLLLFILLIYTYRRRHLSMYESIEDFIRLHDLHPIRYSYKDLNTMTKGFKDKIGEGGFATIYKGKLRSGYDVAVKMLDKSKATSQEFINEVATIGRIHHFNVARLVGFCVEGTKRALIYEFMSNGSLDKHIFLKEGSVSLSYRRIYEISLGVARGVAYLHHGCDMQILHFDIKPQNVLLDDNLTPKISDFGLARLYFTNDSISTLTAARGTLGYMAPELYYKNIGKVSHKSDVYSFGMLLMETASRRRNLNPHVEHSSQLYFPLWIYDQFDKENDIEMEDFTEEEKVLAKKMFIVALWCIQFNPADRPSMNKVIEMLEADDVRSLEMPPKPSIYPENDQSNFDQTTSSMFSQSSHGDLGDEDARDSTY 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0836 739 Pfam Wall-associated receptor kinase galacturonan-binding 37 104 IPR025287 GO:0030247
Alju13g0836 739 ProSitePatterns Protein kinases ATP-binding region signature. 424 446 IPR017441 GO:0005524
Alju13g0836 739 SMART serkin_6 418 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0836 739 SUPERFAMILY Protein kinase-like (PK-like) 403 689 IPR011009 -
Alju13g0836 739 ProSiteProfiles Protein kinase domain profile. 418 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0836 739 FunFam S-receptor-like serine/threonine-protein kinase 389 492 - -
Alju13g0836 739 Gene3D Transferase(Phosphotransferase) domain 1 493 698 - -
Alju13g0836 739 MobiDBLite consensus disorder prediction 705 726 - -
Alju13g0836 739 PANTHER RUST RESISTANCE KINASE LR10-RELATED 391 710 IPR045874 GO:0004672
Alju13g0836 739 CDD STKc_IRAK 424 689 - -
Alju13g0836 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Alju13g0836 739 Pfam Protein tyrosine and serine/threonine kinase 420 688 IPR001245 GO:0004672|GO:0006468
Alju13g0836 739 MobiDBLite consensus disorder prediction 697 739 - -
Alju13g0836 739 Gene3D Phosphorylase Kinase; domain 1 385 492 - -
Alju13g0836 739 FunFam PR5-like receptor kinase 493 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0836 Alju-ChrAlju13 25806212 25816165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0836 361 724 Receptor kinase-like Gene Family AT4G18250 44.562 1.30e-99 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0836 PK_Tyr_Ser-Thr 1e-45 CL0016