Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0832 ATGGAAGCGTTCATAAGCGCAGGAGCGATAGGAAGAGAGAAAGGATTATGCGATCCGGTGAGGGACGACACAGCGTATGTGGATACGGCTCCTTGTGTGAAAGGAGGAGGCCATCTTTATGCCGTGGCTGGTGACTTGTTGGCTCCCCGGTTTCAACCTCAATGTCGTCTGGAATTTGGGACCCTCATAGCCTCAGATTGGGAATCGTTGGTGCCTGATGGAATCAAGTCCTACGCTGATATTCACACACTCCTTTCCTTTGGATTTGAGCTTTCATGGTCGTCACGAGTTTGTGCTGATCTTGATTGTCCAGATGACACTTACTGCTTTTTCAACTATGAAAATCGAAGTCTGATTTGCATTCCGAAGGGGAGCAACTGTGAAAGTCCCCTGGGAATACCTTGTAAATATTGTCCGAAGCTGCCATGGCTGCGCATATTTGCAGAAGATTATCTCCATGGAGTTATAAAAGGATTTTGTGTGGAAGGAACAAAACGTGCTCTTGTCTACGAATTTATGTCCCATGGATCTTTGGATAGATATATTTTTTCTAAAGAGGAAAACTCCTCCTTGAATTATCATAAGATATATGAGATTTCTTTGGGAGTGGCTCGAGGAATAGCTTATCTTCATCATGGATGTGAGATGCAAATATTGCATTTTGATATCAAACCTCATAACATTCTTCTAGACAACAACTTCACTCCAAAGATTTCAGATTTTGGACTGGCAAGATTATACGCTGTTGATGGTAGTATTGCCACTTTGACTGCAGCAAGAGGAACAATAGGGTACATGGCTCCTGAGTTATTCTATAAGAATATTGGAGGAGTGTCTTGTAAAGCTGATGTTTATAGTTTTGGGATGCTTTTGATGGAAATGACAAGTCAAAGAAAGAATTTGAATCCGCATGCTGAACATTCAAGCCAACTTTATTTTCCCTTATGGATTTATGATCAATTTGATGATAATAAAGATATAGAAATGGAAGATTTGATGGAAGAACAAAAGGATTTAGTAAAGAAGATGTTCATAGTAGCACTTTGGTGCATACAACTAAAGCCTAATGACCGTCCTTCAATGAATAAAGTAATAGAGATGTTAGAAGAAAATGATGTTTCAAGTCTTCAAATGCCTCCAAAGCCCTCACTATATCCCAATGAGACAGTTCTAGCGGATGACATATCCAACTTTAATGAAACAACATCAACTACTGTTTCTGTACATTCTCACTGTAGCTTAGGTGAGCGCGTAAGTAATGGAAATTAA 1269 0.3987 MEAFISAGAIGREKGLCDPVRDDTAYVDTAPCVKGGGHLYAVAGDLLAPRFQPQCRLEFGTLIASDWESLVPDGIKSYADIHTLLSFGFELSWSSRVCADLDCPDDTYCFFNYENRSLICIPKGSNCESPLGIPCKYCPKLPWLRIFAEDYLHGVIKGFCVEGTKRALVYEFMSHGSLDRYIFSKEENSSLNYHKIYEISLGVARGIAYLHHGCEMQILHFDIKPHNILLDNNFTPKISDFGLARLYAVDGSIATLTAARGTIGYMAPELFYKNIGGVSCKADVYSFGMLLMEMTSQRKNLNPHAEHSSQLYFPLWIYDQFDDNKDIEMEDLMEEQKDLVKKMFIVALWCIQLKPNDRPSMNKVIEMLEENDVSSLQMPPKPSLYPNETVLADDISNFNETTSTTVSVHSHCSLGERVSNGN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0832 422 Gene3D Transferase(Phosphotransferase) domain 1 154 374 - -
Alju13g0832 422 PANTHER RUST RESISTANCE KINASE LR10-RELATED 158 389 IPR045874 GO:0004672
Alju13g0832 422 ProSiteProfiles Protein kinase domain profile. 1 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0832 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Alju13g0832 422 SMART serkin_6 113 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0832 422 FunFam PR5-like receptor kinase 173 380 - -
Alju13g0832 422 Pfam Protein kinase domain 157 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0832 422 SUPERFAMILY Protein kinase-like (PK-like) 157 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0832 Alju-ChrAlju13 25738415 25743274 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0832 158 410 Receptor kinase-like Gene Family AT1G66910 47.287 2.63e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0832 PK_Tyr_Ser-Thr 1.7e-32 CL0016