Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0829 ATGTCAGATGGTGTAGCGAAATTGGTTGATGAATATAAAAGGCGTGGCAGGAATGTGAAAGGCGTGGGGGGCATTGCTGAAGAAGAAGGGCGTAGAGAAATTGTAAAGTGGTGGCGGGAACTGCTAAAGAAGAAAAATGGACAGAAAATATTTTTGTTGTTGGTGCTGCTTCTGATACTAGGGAATGGTCAGAGCCAGCATGTACCTGATGTTGAAATTGTTCCATTCCATCTCTATAACAATGGGACGATGGTTGAGTTCCCTTCTATTCCTGCCCTTAGTGGAATAAGATTCGCCGTCGATTACATGTACAATGAATCCGACCTCTTACACATGTCCTTGCGTGATCCAAATCTTTGTCTTCCCAGACTCTTTCTTCAACATAGTCTCTACAATTCACCCATTTATCCTCTAGAGTTTGTTGGCCGGAGTGAAAATATTACTTTATTTGATTGTTCTTCAGCTGGGTCGAGACACCTGAGAAATATAAACAACGTACTGGATATGTTCATCTGCCCGATTTATGTTGTTTCCTCTGAAGATAGTATCTTCGAGTGGGACGTAGCTTCCTGCACCATGATGTTTCAGTTAGTTTCGCCAATACAAGCATTTCAGATTCAGAGCTTGGACCTAAAACTAAGATGGCACTGGCCGCAGCCAAAATCTCAAGTTGAAAAGCACAAAACTAGTATGATTCCTGCAATTGCTGTACCAGGATCAATTATGCTGGTGTTGCTTCTCATTGTAAGCTTTTACATATATCGCTACTTCAAGAAGAAGGGAGAAGATCAAGAAAGATTGGAAAAGTTTATGGAAGATTACAAGGAAATGAAGCCTACTAGATTCTCTTATACTGATCTTAAAAGAATTACAAACCATTTCAAGGATAAAATAGGTGAAGGAGCTCATGGGACTGTCTTTAAAGGTAAGCTATCTTCTGAAATTCAAGTGGCTGTAAAAGTGCTTAATAATTCAGATAACGATGGACAAGACTTTAATAATGACATGGGGACTATGGGCAAAATTCATCACATCAATATTGTTCGTTTGCTCGGCTTTTGTATTGATGGTTTTCATCGTGCTCTTGTTTATGACTTCTTTCCTAATGGTTCGCTCCAAAAGTTCATATCTTCACCGGACAACAATGAAAGTTTCCTTAGATGGATGAAGTTGCAACAGTTAGCCCTTGACATAGCAAGAGGGATTGATTACCTTCACCAAGGTTGTGATTATCGAATTCTCCACTTTGACATCAATCCCTCATAA 1266 0.3973 MSDGVAKLVDEYKRRGRNVKGVGGIAEEEGRREIVKWWRELLKKKNGQKIFLLLVLLLILGNGQSQHVPDVEIVPFHLYNNGTMVEFPSIPALSGIRFAVDYMYNESDLLHMSLRDPNLCLPRLFLQHSLYNSPIYPLEFVGRSENITLFDCSSAGSRHLRNINNVLDMFICPIYVVSSEDSIFEWDVASCTMMFQLVSPIQAFQIQSLDLKLRWHWPQPKSQVEKHKTSMIPAIAVPGSIMLVLLLIVSFYIYRYFKKKGEDQERLEKFMEDYKEMKPTRFSYTDLKRITNHFKDKIGEGAHGTVFKGKLSSEIQVAVKVLNNSDNDGQDFNNDMGTMGKIHHINIVRLLGFCIDGFHRALVYDFFPNGSLQKFISSPDNNESFLRWMKLQQLALDIARGIDYLHQGCDYRILHFDINPS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0829 421 FunFam serine/threonine-protein kinase PBS1-like 259 366 - -
Alju13g0829 421 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Alju13g0829 421 Gene3D Phosphorylase Kinase; domain 1 264 366 - -
Alju13g0829 421 Pfam Protein tyrosine and serine/threonine kinase 294 407 IPR001245 GO:0004672|GO:0006468
Alju13g0829 421 Gene3D Transferase(Phosphotransferase) domain 1 367 421 - -
Alju13g0829 421 PANTHER OS07G0415500 PROTEIN 223 420 - -
Alju13g0829 421 SMART tyrkin_6 292 418 IPR020635 GO:0004713|GO:0006468
Alju13g0829 421 ProSiteProfiles Protein kinase domain profile. 292 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0829 421 SUPERFAMILY Protein kinase-like (PK-like) 272 421 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0829 Alju-ChrAlju13 25661822 25663552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0829 215 420 Receptor kinase-like Gene Family AT1G66910 36.574 9.09e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0829 PK_Tyr_Ser-Thr 1e-21 CL0016