Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0828 ATGTTGGGTAACACCAAAGCAAATGGCCAGGACTTTGTCAGTGAAGTGGCAACTATTGGGAGGATACACCATTTTAATGTGGTACATCTTGTTGGCTTCTGTGTGGAAGGTACAAAGCGTGCTCTTCTATATGAATTCATGTCCAAAGGGTCTTTGGATAAACATATTTTTTCTAAAGAAGAAAGCATCTTCTTGAGTTATCGCAAAATACATGAAATATCTTTAGGAGTGGCTCGTGGAATTGCTTACCTTCATCATGGTTGTAACATGCCAATATTGCATTTTGACATCAAGCCTCATAACATTCTTCTTAATGATAGCTTCACTCTAAAGATTCCAGACTTTGGACTGAAAGATATAGAAATGGAAGATTTGACAAGAGAGGAAAACGATTTAGCAAAGAAAATGTTCATAGTGGCACTTTGGTGTATACAATTGAAACCTGTTGATCGACCTTCAATGAACAAAGTAATAGAAATGTTAGAAGTTGAAGATGTTGAAAGTCTTGAAATGCCTCCAAAACCTTATTTATATCCTCATGAAGCAGTGTTAGTGGATGATGATGGATCCACCTCTTACCAAACAGCACCATCTATTTTCTCTGTACGTTCTCATAGTAGTTCAGTTGCGATGCTCAGAGAATCTCATAATGACCCAACTCTAAAGCAAGAAACAAAACGTTTCAGAGCTAGGTGGCTCCTTTTGAGACTTGGACCATCACAATCTGTAATTGATGTCTGTAAAGAAACACAGTAA 756 0.3743 MLGNTKANGQDFVSEVATIGRIHHFNVVHLVGFCVEGTKRALLYEFMSKGSLDKHIFSKEESIFLSYRKIHEISLGVARGIAYLHHGCNMPILHFDIKPHNILLNDSFTLKIPDFGLKDIEMEDLTREENDLAKKMFIVALWCIQLKPVDRPSMNKVIEMLEVEDVESLEMPPKPYLYPHEAVLVDDDGSTSYQTAPSIFSVRSHSSSVAMLRESHNDPTLKQETKRFRARWLLLRLGPSQSVIDVCKETQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0828 251 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0828 251 SUPERFAMILY Protein kinase-like (PK-like) 10 199 IPR011009 -
Alju13g0828 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Alju13g0828 251 Gene3D Transferase(Phosphotransferase) domain 1 2 137 - -
Alju13g0828 251 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0828 251 PANTHER RUST RESISTANCE KINASE LR10-RELATED 125 185 IPR045874 GO:0004672
Alju13g0828 251 Pfam Protein kinase domain 8 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0828 Alju-ChrAlju13 25651215 25653130 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0828 98 190 Receptor kinase-like Gene Family AT1G66980 38.318 3.03e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0828 Pkinase 2.2e-21 CL0016