LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g0825	ATGGAAAGAGAGAGAGGCTCAAGGCGTTGGTATTCAGTGTTGTTCACACTGCTTCTAATGAATGGACTTGCGAGTTCTCAAGAACAGAGCAAAACCTGTGCTCCGTCTCAGTGCGGCATTATCACAAACATCTCATATCCATTTCGACTCCGAGATGACCCGCCCAACTGCGGCGATCCGATCTACGAGCTAGCCTGTGAAAACAACGTCACTCTCCTTGATTTACATGATGCTAATGATTTGGATTACGATTCAAATAAAGGAGGATACCAGCTAATAGGAAGATACAGAGTGGTGGCGTACCTGAATTGCAGCGATCCAGTGAGGGATGACGCAGCGTATGTGGATACCGCTCCCTGTGTGAATTGGGATTCCCAAGGAGGAGGTCATGTTTATGCTGTGGTTGGAGACTTGCTGGTTCGCCAGTTTAAACCTCAGTGTCGTCTTAAATCGGTGACCCTCATAGCTTTAGATTGGGAATCATTGGTGCCTAGTGGAAGAATAAACTCCTACGCTGATGTTCACAAAGTGATTTCCTATGGATTTGAACTTTCATGGTGGCCGCGAGCTTGTGCTAATCATACATGTCCACATGACACCTACTGCTATTTCAACCGTGAAACTGAAAGTCTGCAATGTCTGCATGGTCGTCAGATACGAGTCACCCCCCTCGGATTTGATATCGATTACCGAGTGCCAAAGTTGCGCATAATTGCTGAAGATTTTATCAATGGAATTGCAACAGCATTGTTGATATATACATGCCGAAGAAGGCACTTATCAATGTATGAAAACATTGAAGATTTCATAAGGCTTCATAATCTCACACCATTAAGGTACTCTTACAAGAATTTGAGGACAATGACCAATGGTTTTAAGAATAAGTTAGGAGAAGGAGGATTCGGCACTGTATATAAAGGGAAGTTGAGGAGTGGATATGATGTTGCTATCAAAATGTTGGGCAAATCCAAAACTAATGGCCAAGAATTTATCAGTGAAGTGGCAACTATTGGGAGGATACATCATGCTAATGTGGTACACCTTGTTGGGTTTTGTGTAGAAGGAACAAAGCGCGCGCTTATCTATGAGTTCATGCCAAATAGATCACTAGATAAATATATTTTTTCTAGAGAAGAAAGTTTCTCTTTAAGTTATCACAAAATTTACGAGATATCTCTGGGAATAGCTCATGGAGTTGCTTACCTTCACCATGGTTGTGACATGCAAATATTGCATTTTGACATCAAGCCCCACAATATTCTGCTTGATGAAAATTTCAATCCAAAGATTTCAGATTTTGGACTAGCAAGATTATATTCCTCTGATGATAGTATTGTCACTTTGACTGCAGCAAGAGGGACAATAGGATACATGGCTCCAGAATTGTTCTAG	1392	0.4167	MERERGSRRWYSVLFTLLLMNGLASSQEQSKTCAPSQCGIITNISYPFRLRDDPPNCGDPIYELACENNVTLLDLHDANDLDYDSNKGGYQLIGRYRVVAYLNCSDPVRDDAAYVDTAPCVNWDSQGGGHVYAVVGDLLVRQFKPQCRLKSVTLIALDWESLVPSGRINSYADVHKVISYGFELSWWPRACANHTCPHDTYCYFNRETESLQCLHGRQIRVTPLGFDIDYRVPKLRIIAEDFINGIATALLIYTCRRRHLSMYENIEDFIRLHNLTPLRYSYKNLRTMTNGFKNKLGEGGFGTVYKGKLRSGYDVAIKMLGKSKTNGQEFISEVATIGRIHHANVVHLVGFCVEGTKRALIYEFMPNRSLDKYIFSREESFSLSYHKIYEISLGIAHGVAYLHHGCDMQILHFDIKPHNILLDENFNPKISDFGLARLYSSDDSIVTLTAARGTIGYMAPELF	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g0825	463	Gene3D	Transferase(Phosphotransferase) domain 1	365	463	-	-
	Alju13g0825	463	ProSiteProfiles	Protein kinase domain profile.	290	463	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0825	463	SUPERFAMILY	Protein kinase-like (PK-like)	274	462	IPR011009	-
	Alju13g0825	463	Gene3D	Phosphorylase Kinase; domain 1	264	364	-	-
	Alju13g0825	463	SMART	serkin_6	290	463	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0825	463	FunFam	Os07g0541700 protein	365	454	-	-
	Alju13g0825	463	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	263	463	IPR045874	GO:0004672
	Alju13g0825	463	Pfam	Protein kinase domain	293	462	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju13g0825	463	FunFam	serine/threonine-protein kinase PBS1-like	260	364	-	-
	Alju13g0825	463	Pfam	Wall-associated receptor kinase galacturonan-binding	33	77	IPR025287	GO:0030247
	Alju13g0825	463	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	410	422	IPR008271	GO:0004672\|GO:0006468
	Alju13g0825	463	ProSitePatterns	Protein kinases ATP-binding region signature.	296	318	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g0825	Alju-ChrAlju13	25626298	25630982	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g0825	11	463	Receptor kinase-like Gene Family	AT5G38260	33.002	8.37e-71	234

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Alju13g0825		Pkinase	7.4e-39	CL0016