Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0822 ATGTACTGGGATGGCAGATTTTTGTTGTTGGTGATACTTCTGAAAGAAGGGAATGGTGAAAAGCAGCAAGTGCCTCATCATCAAACTCTTCCATTCCAACTCTATTATAATGACAGCAACGCATTAATGGTTGAGTTTCCCTCTATTCCTGCTCTTCAGGGACTCAGTCTCAGTGTCTATAATATAGACAATAAATCCCACATCTTACAAGTTGAGGATCCAAAAGTTTGTCTTCCCAGACACTTTGTACAACGCCGTCTCTACAACTCATCCAATATTTATCCTTTGGAGTATGCTTATGACAATATGGCCGGCCAAAATGTTACTTTCTTCGATTGTTCTTCGGCTTCGTCGGGATATACGCCCAACTACTGCCCAATTCTTGCTTTGGCCTCTCACGATAGCGTCCTGTCAGGGTACCTAAATTCCTGCACCATGATGTTTCGGTTGCCTTCACCAATACCTGCAGTGGATCTTCAGGTGAACAAGTTACGACTCAAATGGAACCAACCAAGAGATGAAAAGCATAAAACCAGCAAAATGCTCAGAATTATTTTTCCAACAGGTTTCATTGTGCTGCTTTTGCTGTTGGTTGTGTGCTTCTCCATATGCCGCTACTTCAAGAAGAAAGGAGATGATCAAGTCAGACTTGAAAAGTTTTTGGCGGATTACAAGGCACTTAAGCCTACCAGATTCTCTTACGCTGATATCAAGAGAATCACAAACAGTTTCAAGGATAAATTAGGTGAAGGTGCTCATGGAACAGTCTTCAAAGTGTCAATGACAGCAGTAAGGGGAACACTAGGATATATAGCACCTGAAGTTTTTTCTCGAAACTTTGGAAATGTGTCCTACAAATCAGATATTTACAGTTATGGAATGCTACTTCTAGAAATGGTTGGTGAAAGGAAAAACGTCAGCACAAATCAAGAAACTTTTCAAGTACTGTATCCACAGTGGATCCATAATTTGGTTGAAGGAGGATATGCAAGTTTTCACATAGAAGATGAAGTTGACATTAGAATTATTAAGAAATTAGCAATTGTAGGACTTTGGTGTATTCAATGGCATCCAATAAGTCGTCCATCCATGAAAACGGTTATACAAATGTTGGAAGGAGAAGTAGATAAATTAATGGTGCCTCCCCCTCCGTTTGATTTCACTACTTCAACCAATACAAGTACCACTGCTCCTGCAAGACACTTGAATTTAGAGTTAGATGTGATTCATGAATTAGAATAA 1242 0.3969 MYWDGRFLLLVILLKEGNGEKQQVPHHQTLPFQLYYNDSNALMVEFPSIPALQGLSLSVYNIDNKSHILQVEDPKVCLPRHFVQRRLYNSSNIYPLEYAYDNMAGQNVTFFDCSSASSGYTPNYCPILALASHDSVLSGYLNSCTMMFRLPSPIPAVDLQVNKLRLKWNQPRDEKHKTSKMLRIIFPTGFIVLLLLLVVCFSICRYFKKKGDDQVRLEKFLADYKALKPTRFSYADIKRITNSFKDKLGEGAHGTVFKVSMTAVRGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGERKNVSTNQETFQVLYPQWIHNLVEGGYASFHIEDEVDIRIIKKLAIVGLWCIQWHPISRPSMKTVIQMLEGEVDKLMVPPPPFDFTTSTNTSTTAPARHLNLELDVIHELE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0822 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 216 260 IPR045874 GO:0004672
Alju13g0822 413 Gene3D Transferase(Phosphotransferase) domain 1 207 381 - -
Alju13g0822 413 Pfam Protein kinase domain 260 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0822 413 SUPERFAMILY Protein kinase-like (PK-like) 261 398 IPR011009 -
Alju13g0822 413 ProSiteProfiles Protein kinase domain profile. 10 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0822 Alju-ChrAlju13 25583426 25585189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0822 259 384 Receptor kinase-like Gene Family AT1G66980 46.617 1.29e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0822 Pkinase 4.5e-08 CL0016