Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0821 ATGGGAAACGAGGAAGGGTTATGGTGTTGTTGGTGTTGGTGTTTGGTGTTGTGTCTCTCTCTGCTTCTAAGGAACGGAGTTGTGAGTTCTCAAGTTGCCAACAAATCATGCACTTCTAGTTGCGGCGTTATCACAAACATATCATATCCATTCCGACTACCACATGACCCACCCCACTGCGGCCACCGCAACTACCAGCTAGCCTGTGAAAACAACGTCACCCTCCTTCATTTACGTGAGGATAATGAGTACAATTTGACTAATGAAACACACCGGGTGGTAGGAACATATAGAGTTGTGGAAATAGACTACAACAACTACAAAATCCGACTCGTAGATGCTGGAATTCAGGACGGCAATTGCTCCTCCCTCCCTCTCTCTTCCTTATCCCTACAAAATTTCAACTATTACGTGTCTCCTTACGAGTATACTGAAGGTAACAGATATGCCTATCGCGCTAGTATTCTATACAGGAACGGAATAGATTATTTATTCAGGCAGGTGGGGTACCTGAAGTGCAGCGATCCGGTGAGGGATGACACGGCGTATGTGGATACGGCTGCCTGTGTGAACTGGGAATCCAAAGAAGGAGGCCATGTTTATGCCGTGGCCGGAGACTTGCTGGCCGACCAGTTTAGACCTCAGTGTCGTCTGAAATTGGTGGCCCCCATAGCCTCAGATTGGGAAACATTGGTTCCAGGTGGAATAAAGTCCTACGCTGACATCCACAGGGTGATTTCCTATGGATTTGAGCTTTCATGGTGGGAACGAGCTTGTGATAATGTTAATTGTCCAAAAGATACTGACTGCCTTATCATGATGACGGAAACTCAGAGTCCAATTACGATATGCTGGGCAAGGCGGTCCAAGTTGCGCCTATTAGTCAAAGGAATAGCTCATGGGATTGCTTATCTTCATCATGGATGTGACATGCAAATATTGCATTTTGATCTCAAGCCTCATAATATTCTACTTGATGAGAACTTTACTCCAAAAATATCAGATTTTGGACTGGCAAAATTGTATTATGTTGACAATAGTATAGTCACTTTGACTGCAGCAAGAGGGACAATAGGGTACATGGCTCCCGAATTATTCTACAAAAATATTGGAGGAGTGTCTCACAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGACAAGCCGAAGGAGGAATTTGAATCCACATGCAGAACATTCAAGTCAGCTTTACTTTCCCTTGTGGATCTATGACCAATTTGATGAGGAGAAAGATATTGAAGTGGAAGATTTGGCAGGAGAGGAAAAGGATTTGGCAAAGAAAATGTTCATAGTAGCACTCTGGTGTATACAATTAAAACCTACAGATCGACCTTCGATGAAGAAAGTAATAGAAATGTTAGAAGTAGATGATGTTTTAAGTCTTGAAATGCCTCCAAAACCTTCTCTGTATCCTAATGAAACATTTTTAGCGAACTATGGATCCAGTTCCTACCAAACATCATCTGTTATCTCTGAACGTTCTCATAGTAGTTCAGGTGAAGGCACAAGTAGTGGAAAATAA 1551 0.4262 MGNEEGLWCCWCWCLVLCLSLLLRNGVVSSQVANKSCTSSCGVITNISYPFRLPHDPPHCGHRNYQLACENNVTLLHLREDNEYNLTNETHRVVGTYRVVEIDYNNYKIRLVDAGIQDGNCSSLPLSSLSLQNFNYYVSPYEYTEGNRYAYRASILYRNGIDYLFRQVGYLKCSDPVRDDTAYVDTAACVNWESKEGGHVYAVAGDLLADQFRPQCRLKLVAPIASDWETLVPGGIKSYADIHRVISYGFELSWWERACDNVNCPKDTDCLIMMTETQSPITICWARRSKLRLLVKGIAHGIAYLHHGCDMQILHFDLKPHNILLDENFTPKISDFGLAKLYYVDNSIVTLTAARGTIGYMAPELFYKNIGGVSHKADVYSFGMLLMEMTSRRRNLNPHAEHSSQLYFPLWIYDQFDEEKDIEVEDLAGEEKDLAKKMFIVALWCIQLKPTDRPSMKKVIEMLEVDDVLSLEMPPKPSLYPNETFLANYGSSSYQTSSVISERSHSSSGEGTSSGK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0821 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Alju13g0821 516 Gene3D Transferase(Phosphotransferase) domain 1 275 471 - -
Alju13g0821 516 MobiDBLite consensus disorder prediction 497 516 - -
Alju13g0821 516 Pfam Protein kinase domain 289 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0821 516 ProSiteProfiles Protein kinase domain profile. 123 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0821 516 SUPERFAMILY Protein kinase-like (PK-like) 291 465 IPR011009 -
Alju13g0821 516 PANTHER RUST RESISTANCE KINASE LR10-RELATED 289 488 IPR045874 GO:0004672
Alju13g0821 516 Pfam Wall-associated receptor kinase galacturonan-binding 37 113 IPR025287 GO:0030247
Alju13g0821 516 SMART serkin_6 228 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0821 516 FunFam PR5-like receptor kinase 269 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0821 Alju-ChrAlju13 25578837 25582237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0821 297 479 Receptor kinase-like Gene Family AT4G18250 49.735 4.45e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0821 Pkinase 8.2e-28 CL0016