Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0820 ATGTATGAGATATCCTTAGAAGTGGCTTGTGGGATTGCTTATGTTCATTGTGGTTGTAACAAACAAATTCTACATTTTGATATCAAGCCCCATAACATTCTTCTTAATGATAACTTTATTCCTAAAATATCAAATTTTGGACTTGTAAAATTATATTCTACTGTCAATAGTATTGTGACTTTGATTGCAATAAGAGGAACACTTGGAAACATGGCTCCTGAATTATCCTACAATAATATTGAGGGAATCTCTTATAAGGTTGATGTTTATAGTTCTGGCATATTTTTGACGGAAATGGTAATAGAAATGTTAGAAGTGGACGATGTTTCAAGTCTTAAAATGCCTCCAAAACCTTCTCTATTTCCCGATGAAACATTTTTAGTAGATGATGGATCTAGCTCTTACCAAACAATATCAGGGATCTCTACGCATTCTCATGGGAGTTTAGGTGAGGGCACATGTGATGGGAAATAA 474 0.3397 MYEISLEVACGIAYVHCGCNKQILHFDIKPHNILLNDNFIPKISNFGLVKLYSTVNSIVTLIAIRGTLGNMAPELSYNNIEGISYKVDVYSSGIFLTEMVIEMLEVDDVSSLKMPPKPSLFPDETFLVDDGSSSYQTISGISTHSHGSLGEGTCDGK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0820 157 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 100 IPR045874 GO:0004672
Alju13g0820 157 SUPERFAMILY Protein kinase-like (PK-like) 3 111 IPR011009 -
Alju13g0820 157 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0820 157 Pfam Protein kinase domain 3 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0820 157 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
Alju13g0820 157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 23 35 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0820 Alju-ChrAlju13 25568576 25569255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0820 1 136 Receptor kinase-like Gene Family AT5G38260 39.855 8.59e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju13g0820 Pkinase 2.8e-18 CL0016