Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0817 ATGAAAATGGTGAGTGCTGATCTTCCTGAAGAAATTGTAGAGGAGATATCGTTGAGGCTTCCTGTAAAATCCCTACTTCGATTCAAATCTGTGGCGAAATCCTGGTACGAACGAATCGCTAATCCATCTTTTATTGCCAAACAATTCGACTGGTCTGAATCAGTCTCTGAAAACTGCCACCACCAGTTGATCTTTCGCTTGCACAATCTCACTATGAAGCCCTGCCTTGCTCTGATTTCCGATCAGGAAACCAAGGATGTTGAATTGCCATTTCCTGAGAAGGATGTGGAATACATATTTGTTTATGGGCAATGTAATGGGATTTTTTGTCTTTATGGGGTTTATGGAGGAGAGAAATCTGGTAGGTCCAGTTTGATTCTGTGGAACCCAGGAACAAAAGAGGTGAAGGTTCTTCCTTCATCTCAGAACCTACCCAAAGACATGGTTTATATCATGTTTGGGTTTGGTACTGATCCTCTTACAAAGGATTACAAGGTTGTTCGATTTGGGAATTTGGATTTTGAAGGAAGAGAACTTCCTCCAGTTGAGGTATATAATCTCAGTACTAATTCTTGGAGAACCATAGATGTCGTTGTCCCCGCTTTTCGTCTGTGCTATCCAAAATTTAGGGCTTATTTGAATGGGTTCTATCACTGGTTAACTGATGATAATGATAGGGCCATATTGTTCTTTGATTTCAGCAAGGAGGTGTTTGGTAAGATTCAATTGCCTCCTGGAGTTGATCAGTCTGTTGAATTAAATGTTGCTGTGATTGATGATAAACTTGCTTGTATTGCAACATACGTGACCAATCACAGATTCGAAATCTGGGTGATGAACGAGTATGGAGTTGAGAGTAGCTGGACTAAGAAATCTGTTATGGGACCATGCCCTAAGTTTGGATCATTTTTAGGGCTTTTGGGAGATAATGAGATTCTTGTTGAAGATGGATGCCAGTTGGTTTCTTATAATCTTAAGAATCAGCAGATTAAGGGGCTTGAAATCCATGGAATTCCAAAAATGTTCAAAGTGTTTGGCTATTCGGAAAGCTTGGTTCCTTTGAACATCTAA 1071 0.4006 MKMVSADLPEEIVEEISLRLPVKSLLRFKSVAKSWYERIANPSFIAKQFDWSESVSENCHHQLIFRLHNLTMKPCLALISDQETKDVELPFPEKDVEYIFVYGQCNGIFCLYGVYGGEKSGRSSLILWNPGTKEVKVLPSSQNLPKDMVYIMFGFGTDPLTKDYKVVRFGNLDFEGRELPPVEVYNLSTNSWRTIDVVVPAFRLCYPKFRAYLNGFYHWLTDDNDRAILFFDFSKEVFGKIQLPPGVDQSVELNVAVIDDKLACIATYVTNHRFEIWVMNEYGVESSWTKKSVMGPCPKFGSFLGLLGDNEILVEDGCQLVSYNLKNQQIKGLEIHGIPKMFKVFGYSESLVPLNI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0817 356 Pfam F-box domain 7 42 IPR001810 GO:0005515
Alju13g0817 356 SUPERFAMILY Galactose oxidase, central domain 114 328 IPR011043 -
Alju13g0817 356 SUPERFAMILY F-box domain 6 60 IPR036047 GO:0005515
Alju13g0817 356 PANTHER BNACNNG10540D PROTEIN 7 294 - -
Alju13g0817 356 Pfam F-box associated 212 298 IPR006527 -
Alju13g0817 356 NCBIfam F-box protein interaction domain 103 295 IPR017451 -
Alju13g0817 356 CDD F-box_AtFBW1-like 6 44 - -
Alju13g0817 356 Gene3D - 6 44 - -
Alju13g0817 356 SMART fbox_2 8 48 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0817 Alju-ChrAlju13 25527635 25528705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0817 183 347 Carbohydrate Esterase AT1G25141 25.143 1.92e-07 49.7