Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0812 ATGAGATCAGTTGCCGTTGCTGTCAACGGCGGCTCCAGCGCCGGCAGGGGTAGCCGGCGAGCCGTCCAGTGGGCGGTGAAGAATCTTATGCCTCAAGCCGATAGGTTCATTTTAGTTCACGTTATGCCCAGAATCTCTTCAATTCCAACCCCATCTGGAGAGTGTATCCCTGTTATGGATCTGGATGTCAATGTGGCAGCAGCTTACATTCAGGATGTAAAGGAGAAGTTCGAGCAAGTCTTTATTCCATTCAAGAAACTCTGCAAAGCAAGCACGGTTGAAACTTTGTTGCTGGAAGATGACAGTCCTGCTACTGCACTACTTAGATACATATCAGAATCAGAGATCCAAATATTAGTGTTGGGAACTGACTCTCCTAATTTCATAACAAGGAAGCTAAAAGGACCAGGGATACCAACGACTGTTCTAGGAAGTGCTCCTGACACTTGTGACGTATATCTTGTTGCTAGAGATAGAATTATATCAAAATTAGCTGATTCTTCATCTTCACCCTCGCGTGAGACTAGTTCTAGGTACTCTGTGTCTACTCAAGGGAATACAGGAGATGCCGATGCTCACTCTGGTAGAGAAATAACTGGATTTAATTCTCCCGCAACAGTACCTGACTTTATCACAAACAGATTCCCATCAATGTCAGAGTGGAGTTATATAGGTTCTCAAACATCTAGTCCCGCAAATTCTCTTAAGAATCCCTCTATAAATGAAGGCAATCTAGAAAGCTTTAGAGATGATGCTGAAACCTCAAGCATCTACTCTTTTGATTCCATGGCTTCTGCACAAATTGAACAACCAGTAATGCAAGAAGTAAAGGAGCTGCAGCTGGAGTTACGGAATACTATTGCCATGTATAAACAGGTTTGTGAAGAGTTGGCTCTTTATCAAAGTAAGGTTCATTTACTTTCAGCTGAATATCTTGAAGAATCAAAAAGAGTGAACGATTCCCTGAAAAGAGAGGAGAGTTTGAGAAAGATTGCTGCTGAAGAAAAAGAAAATTATTTGAAAGTCATGAAGGAACTTGATGAGGCGAAAATTAAGTTTGCAAAAGAATCCTATGAAAGGCAGATGGCTGAACTTAATGTCCTCAGAGAATCTGTGGAAAGGAAGAGAATAATTGATACATTGCTCTCAAGTGACAAGAGGTACAGAAAGTACACTATGGACGAAATTAAAGAAGCAACAGATAACTTCTCAAAGGATCTTTTAATTGGTGAAGGAGGTTATGGGAAGGTTTATAAGTGCAGCCTCGATCACACTACAGTAGCTGTAAAGGTTCTGCACCAGGATGCATTTAACAAGAAAGAGGAGTTTCTGAAGGAGGTTGAGATTCTGAGTCAGCTACACCATCCATACATGGTTTTGCTGCTAGGGGCCTGTCCTGAAACTGGCTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTCGAAGACTATCTTTTCAACAACAGCGGGAAACCGCCACTTCCTTGGTACATTCGATTCCGTATAGTTTTTGAAGTGGCCTGTGGGTTATCATTCCTGCATAATTCAAAACCTGAGCCAATCGTTCATCGAGATATGAAACCAGGAAATATCCTGTTGGACAGAAATTACGTGAGCAAAATTTCAGATGTTGGATTGGCTAAGCTCCTTTCAGACGTCATACCTGACAATGTCACCGAGTACAGAGAATCTGTGCTTGCTGGTACTCTGCATTATATGGATCCAGAGTATCAGAGAACTGGCACTGTCCGACCAAAATCGGATGTATATGCATTGGGGGTTATAACTCTTCAACTGATAACTGCTCACCATGCACGAGGAGTCATTGTGGCCGTTGAAAATGCAGTTAAAAATGGCTCCATCTCTCATATTTTAGATAAATCAGCTGGAGATTGGCCACTGACTGAGGCAGAAGAGTTGGCTCAAATTGCCCTAAGATGCTCGGCACTGAGATGCAGAGACAGACCAGATCTTGATACCGAAGTTCTTCCACTGCTCAAAAGAATCTGTGATGTGGCAAATGCTACTGCAAAAGTGGGAAGCAATAGTAGCACTTGCCCACCAAGCCAATATTATTGCCCAATCCTTCAGGAAATAATGGATGATCCACATATTGCCGCGGATGGTTTTACCTACGAGTACAGAGCAATCAAAGCATGGCTCAGCAGACATAATGTATCACCTGTAACAAAGCTTACAATGCAGCATTCAACATTGATTCCAAACCATACATTACGTTCCGCCATTAGGGAGTGGAGATCAGGACAGAAGTGA 2274 0.4252 MRSVAVAVNGGSSAGRGSRRAVQWAVKNLMPQADRFILVHVMPRISSIPTPSGECIPVMDLDVNVAAAYIQDVKEKFEQVFIPFKKLCKASTVETLLLEDDSPATALLRYISESEIQILVLGTDSPNFITRKLKGPGIPTTVLGSAPDTCDVYLVARDRIISKLADSSSSPSRETSSRYSVSTQGNTGDADAHSGREITGFNSPATVPDFITNRFPSMSEWSYIGSQTSSPANSLKNPSINEGNLESFRDDAETSSIYSFDSMASAQIEQPVMQEVKELQLELRNTIAMYKQVCEELALYQSKVHLLSAEYLEESKRVNDSLKREESLRKIAAEEKENYLKVMKELDEAKIKFAKESYERQMAELNVLRESVERKRIIDTLLSSDKRYRKYTMDEIKEATDNFSKDLLIGEGGYGKVYKCSLDHTTVAVKVLHQDAFNKKEEFLKEVEILSQLHHPYMVLLLGACPETGCLVYEYLENGSLEDYLFNNSGKPPLPWYIRFRIVFEVACGLSFLHNSKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLLSDVIPDNVTEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYALGVITLQLITAHHARGVIVAVENAVKNGSISHILDKSAGDWPLTEAEELAQIALRCSALRCRDRPDLDTEVLPLLKRICDVANATAKVGSNSSTCPPSQYYCPILQEIMDDPHIAADGFTYEYRAIKAWLSRHNVSPVTKLTMQHSTLIPNHTLRSAIREWRSGQK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0812 757 SUPERFAMILY RING/U-box 687 753 - -
Alju13g0812 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 757 IPR013083 -
Alju13g0812 757 ProSiteProfiles Protein kinase domain profile. 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0812 757 Coils Coil 329 375 - -
Alju13g0812 757 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 136 - -
Alju13g0812 757 Pfam Protein tyrosine and serine/threonine kinase 408 659 IPR001245 GO:0004672|GO:0006468
Alju13g0812 757 Gene3D HUPs 1 155 IPR014729 -
Alju13g0812 757 SMART Ubox_2 690 752 IPR003613 GO:0004842|GO:0016567
Alju13g0812 757 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 376 475 - -
Alju13g0812 757 CDD STK_N 3 157 - -
Alju13g0812 757 SMART serkin_6 403 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0812 757 Pfam U-box domain 688 755 IPR003613 GO:0004842|GO:0016567
Alju13g0812 757 PANTHER OS02G0152300 PROTEIN 4 751 - -
Alju13g0812 757 FunFam Os07g0541700 protein 476 565 - -
Alju13g0812 757 SUPERFAMILY Protein kinase-like (PK-like) 386 659 IPR011009 -
Alju13g0812 757 ProSiteProfiles U-box domain profile. 686 757 IPR003613 GO:0004842|GO:0016567
Alju13g0812 757 MobiDBLite consensus disorder prediction 166 190 - -
Alju13g0812 757 MobiDBLite consensus disorder prediction 166 205 - -
Alju13g0812 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Alju13g0812 757 Coils Coil 276 296 - -
Alju13g0812 757 CDD RING-Ubox_WDSUB1-like 688 742 - -
Alju13g0812 757 Gene3D Phosphorylase Kinase; domain 1 382 475 - -
Alju13g0812 757 ProSitePatterns Protein kinases ATP-binding region signature. 409 430 IPR017441 GO:0005524
Alju13g0812 757 Gene3D Transferase(Phosphotransferase) domain 1 476 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0812 Alju-ChrAlju13 25468525 25474116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0812 3 754 Plant U-box Gene Family AT5G57035 53.462 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju13g0812 PK_Tyr_Ser-Thr 2.2e-39 CL0016