Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0806 ATGGAGGACGATCGGGTGGAGAAGGAGGAGGAGGAGGACAATGTGGGACCCATCGCTGGGGAGGAAGAAGAAGGAGAGGTAGGCTCAAGCTTGACGATGGAGAGGGTGGCTGTAGCTAAGAAGTTCATCGAGAATCATTACAGAGCTCAGATGAAGCTGATAAAAGATCGCAAAGAGAGGCGTTCAGTGCTGGAAAAGAAGTTAGCATCTTCTCGTGTACCAGAAGAAGAACAGATACATCAACTGAAGGATTTAGAGCGCAAGGAGACGGACTATATACGGTTAAAACGACACAAAATATGTGTCAGTGATTTTCACCTTCTAGATATTATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGTCGCGAGAAAAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAGCGGAACTTATTAGCAGAAGTTGCGAGTCATTGCATTGTGAAACTCTATTACTCCTTTCAGGATGCTGATTACTTATATCTGATAATGGAATATTTACCTGGTGGTGATTTAATGACTTTACTGATTAGAGAAGAAACTTTGACTGAAAGTGTGGCTAGATTTTACATCGCACAAAGCGTTTTAGCCATAGAATCTATTCATAAACACCATTACATTCATCGTGATATAAAACCTGACAACCTTCTGTTGGACAAAAAGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCACTTGATTGCACAAATTTATCATCAATAAATGAAGGTGAAGTCTTAGATGATGAGAACTTGAGTGATACCATGGATATTGATGAATCTTTACCAAATTCTAAATGTGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAATAAACAGGAGGAAGTTGGCATTTTCTACAGTTGGAACGCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCGATCATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCTGATGACCCAGTAACTACGTGTAGAAAGATTGTACACTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAGGCAATGAATCTGATCTGTAGGTTGCTTTGTGAAGCTGACCAAAGACTTGGTACTAGAGGGGCAGATGAAATTAAAGCACATCCTTGGTTCAGAGATGTTGTATGGGATAAACTATATGAAATGGAAGCAGCATTCAAACCACAAGTCAATGGAGAGCTTGACACACAGAATTTTATGAAATTTGACGAGGTTGAACAACCAAAACCAACTAGAACTGGATCTGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAACTTTGACGCGGTCAAGGGTATGCATCATACTATGGATAGGGGGATGAGGAGCATGTCATCACCTATTCCACCAGTCACTGAGCCTCCACAGAGTGATTCTGGAAAAGACTATTCCTCCGGATATTCGAGCCGGTAG 1569 0.4175 MEDDRVEKEEEEDNVGPIAGEEEEGEVGSSLTMERVAVAKKFIENHYRAQMKLIKDRKERRSVLEKKLASSRVPEEEQIHQLKDLERKETDYIRLKRHKICVSDFHLLDIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHKHHYIHRDIKPDNLLLDKKGHMKLSDFGLCKPLDCTNLSSINEGEVLDDENLSDTMDIDESLPNSKCGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCEADQRLGTRGADEIKAHPWFRDVVWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEQPKPTRTGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHTMDRGMRSMSSPIPPVTEPPQSDSGKDYSSGYSSR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0806 522 Gene3D Phosphorylase Kinase; domain 1 64 188 - -
Alju13g0806 522 MobiDBLite consensus disorder prediction 1 20 - -
Alju13g0806 522 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Alju13g0806 522 FunFam Non-specific serine/threonine protein kinase 66 188 - -
Alju13g0806 522 Gene3D Phosphorylase Kinase; domain 1 431 441 - -
Alju13g0806 522 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju13g0806 522 FunFam Non-specific serine/threonine protein kinase 189 256 - -
Alju13g0806 522 Gene3D Transferase(Phosphotransferase) domain 1 189 256 - -
Alju13g0806 522 SMART serkin_6 105 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0806 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 447 - -
Alju13g0806 522 Gene3D Transferase(Phosphotransferase) domain 1 311 430 - -
Alju13g0806 522 SUPERFAMILY Protein kinase-like (PK-like) 102 475 IPR011009 -
Alju13g0806 522 FunFam Non-specific serine/threonine protein kinase 431 441 - -
Alju13g0806 522 CDD STKc_NDR_like 103 477 - -
Alju13g0806 522 ProSiteProfiles Protein kinase domain profile. 105 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0806 522 Pfam Protein kinase domain 305 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0806 522 Pfam Protein kinase domain 105 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0806 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Alju13g0806 522 FunFam Non-specific serine/threonine protein kinase 311 430 - -
Alju13g0806 522 CDD MobB_NDR_LATS-like 39 100 - -
Alju13g0806 522 SMART pkinase_C_6 413 478 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju13g0806 522 MobiDBLite consensus disorder prediction 491 522 - -
Alju13g0806 522 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0806 Alju-ChrAlju13 25419333 25428302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0806 21 493 AGC Kinase Gene Family AT4G33080 76.151 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Alju13g0806 Pkinase 1.2e-43 CL0016