Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0803 ATGAAAAGCTATTGCTACAAGGCAAAGCAAAAGGCTATTATGGAGGAAATATCTTCTACTGTTGCAGTACCATTTACACTTGGCAAGTTGACTCAGGAGTCATCAGTAACAACAACCCACGTGGAGATATCTGGGTTGAAGCTTATAGCTAATACAGCAGCAGCTTTGATTTTGAATCCTGCAATGGAGGATTGTGAAAATCAAAGGGGTTTAAGTTCACAGCATCAGATTACTGTATCTGCAGAACAAAAGGAGAATCATGTTGTTGGAGATTCCCTTGTTTCAGATTTGACTACTGGATGTGACAGAAATTGTGTTGGGAATGAAACCAACGATCAGAAATGCAAGGAAGATGATTTTGAATGTCCAAATGATTCAAGCTCTCAAACTGTTTCTGGGGACCAATCTTCAACTTTGAGGACTAATTGTTCTGAGATTGATCCACCAATTAGTACCGTCAAGGTTGAAGAAGATGATGATATAGTACTAAAGCCAGTGAAGAAAATGGTCTCTGTTGAAATGGATATTGAGATTTATGATGGAAGTGGATCAGATGCATGTAATTCTAAGCCATCAGATTCTGTTCTGGCGATTTCAGAGGAGAAAGTATGCAGAAGGAGCTACCAGAATGGATTAGAAATGAATAGTGGGGTCCTTTGGGGATTTTCATCAATCTGTGGAAGGAGAGATGAGATGGAAGATGCTGTTTCAGTTGAGCCTCCTCAACTTTTGCAAGTCCCTTCACAGATGCTAATGGAAAACCATGTGACTGAAATCCCAAAATACTCAGAAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCTGCCAGGTTGCTAATTACTGCCGGGAACGTCTCCATTTGGTGCTGATTGAGGAGATAGAGGCTGCAGAAACAAGGTTGGGAGAAAACTGGCAGGAGCACTGGAAGAAAGCATTGTGCAATTGTTTTCAGAGAGTTGATGATGAGGTTGATGGAAAAAGTGAAGCTAATAATAATGAAGACAACAATCATGGATCTGAGTCTGGTTCTGAACCTCTTGCTCCTGAAACTGTTGGTTCTACTGCTGTGGTTGCCATTTTGAGCCAAACCTACATAATAGTAGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGCGGAAAAGAAGCCATTCCACTGTCTTCTGACCACAAACCAAATAGGGAGGATGAGTGGGCAAGAATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACAGAGTCCTTGGGGTTTTGGCAGTGTCAAGGTCCATTGGTGACAGATATTTGAAACCATGGGTAATCCCTGAACCAGAAATAGAGTTTATCCTCAGAGAGAAAAATGATGAGTGCCTTATTCTAGCCAGTGATGGTCTATGGGATGTGATGACAAATGAAGAAGCCTGCCAGGCTGCAAGAAGCAGGATCCTTCTTTGGCACAAAAAGTACGGCAACGGCGGCGGCAACAACAACAACAACGGATCTGCTGAACAAGAAGAAGAACAGGGACTTGATCCTGCAGCTCAGTTTGCTGCAGAGTATCTATCTAGACTTGCCCTTCAAAGGGGAAGTAAGGATAACATATCTGTTATTGTGGTTGACTTGAAGGCACAAAGAAAATCTAAGACAAGGGCATAA 1647 0.4256 MKSYCYKAKQKAIMEEISSTVAVPFTLGKLTQESSVTTTHVEISGLKLIANTAAALILNPAMEDCENQRGLSSQHQITVSAEQKENHVVGDSLVSDLTTGCDRNCVGNETNDQKCKEDDFECPNDSSSQTVSGDQSSTLRTNCSEIDPPISTVKVEEDDDIVLKPVKKMVSVEMDIEIYDGSGSDACNSKPSDSVLAISEEKVCRRSYQNGLEMNSGVLWGFSSICGRRDEMEDAVSVEPPQLLQVPSQMLMENHVTEIPKYSEAHFFGVYDGHGGCQVANYCRERLHLVLIEEIEAAETRLGENWQEHWKKALCNCFQRVDDEVDGKSEANNNEDNNHGSESGSEPLAPETVGSTAVVAILSQTYIIVANCGDSRAVLCRGKEAIPLSSDHKPNREDEWARIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEIEFILREKNDECLILASDGLWDVMTNEEACQAARSRILLWHKKYGNGGGNNNNNGSAEQEEEQGLDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKAQRKSKTRA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0803 548 MobiDBLite consensus disorder prediction 124 144 - -
Alju13g0803 548 ProSiteProfiles PPM-type phosphatase domain profile. 219 538 IPR001932 -
Alju13g0803 548 MobiDBLite consensus disorder prediction 336 350 - -
Alju13g0803 548 Pfam Protein phosphatase 2C 221 531 IPR001932 -
Alju13g0803 548 Gene3D - 207 548 IPR036457 -
Alju13g0803 548 MobiDBLite consensus disorder prediction 116 144 - -
Alju13g0803 548 MobiDBLite consensus disorder prediction 327 350 - -
Alju13g0803 548 PANTHER PROTEIN PHOSPHATASE 171 538 IPR015655 GO:0004722|GO:0006470
Alju13g0803 548 FunFam Protein phosphatase 2C 51 212 546 - -
Alju13g0803 548 SMART PP2C_4 209 536 IPR001932 -
Alju13g0803 548 SUPERFAMILY PP2C-like 212 539 IPR036457 -
Alju13g0803 548 ProSitePatterns PPM-type phosphatase domain signature. 267 275 IPR000222 GO:0043169
Alju13g0803 548 CDD PP2Cc 221 538 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0803 Alju-ChrAlju13 25391272 25394098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0803 171 547 PP2C-type Phosphatase Gene Family AT4G26080 57.368 6.65e-138 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1080 06 10232811 10235224 Alju13g0803 13 25391272 25394098 CCT