Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0802 ATGAAAAAAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCTGTTCCTGATCAAGTTTTCTTGACTGAGAGCGCGACCTTCAGGGAAGGGGATCTTCTGGTCAATAAGTATGGCGTTCGAATTATCTCTCAGACTGAAGTTGAAGCTCTACCCCCTATCAGAGCACTAGACAACCAGTTAAATTTAGAAGACATAGACGCAATCAAAGTGGTTGGAAAGGGAAGCGGCGGTGTTGTGCAATTGGTGCAACACAAATATACTAATCAGTTTTTTGCATTGAAGGTAATTCAAGTGAATATTGACGAGTCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCTCAATGTCCCAATGTGGTTGTCTGTTACCATTCCTTCTATGAAAATAATGTTATATCAATCGTCTTAGAGTACATGGATGGAGGGTCTCTGGAAGATTTTCTGAAGAAAGTAAAATCAATTCCAGAGGCATATCTTGCTGCCATTTGCAAGCAGGTGCTGAAGGGTTTAACGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTTAGTGCAATCATGGAAAGTACATCTGGTCAAGCTAACACTTTCATTGGAACACGTATCTATATGTCTCCTGAGAGAATCAATGGATTCCAGCGCTACAACTATAAATGTGACATATGGAGTTTGGGACTAATATTGCTTGAGTGTGCTACAGGGAGGTTTCCATATACACCGCCTGATCGTGGAGAAAGATGGGAAAATGTGTTTCAGCTTATTGAAGCTGTTGTTGAAACTCCTCCTCCCTCTGCTCCGCTTGATCAGTTTTCTCCAGAATTCTGCTCATTTGTTTCAGCATGTTTGCAGAAAAATCCAAATAACAGATTGTCAGCTCAAGAACTTTTGAGACATCCATTTATCAATATGTATGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAACTCAGGATCTCCCCTTGCTACTCTATAA 1056 0.4044 MKKGSLGPNLKLTVPVPDQVFLTESATFREGDLLVNKYGVRIISQTEVEALPPIRALDNQLNLEDIDAIKVVGKGSGGVVQLVQHKYTNQFFALKVIQVNIDESMRKQIAQELKINQSAQCPNVVVCYHSFYENNVISIVLEYMDGGSLEDFLKKVKSIPEAYLAAICKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQRYNYKCDIWSLGLILLECATGRFPYTPPDRGERWENVFQLIEAVVETPPPSAPLDQFSPEFCSFVSACLQKNPNNRLSAQELLRHPFINMYEDLDVDLSAYFSNSGSPLATL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0802 351 Gene3D Phosphorylase Kinase; domain 1 42 145 - -
Alju13g0802 351 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Alju13g0802 351 Gene3D Transferase(Phosphotransferase) domain 1 146 347 - -
Alju13g0802 351 SUPERFAMILY Protein kinase-like (PK-like) 64 333 IPR011009 -
Alju13g0802 351 ProSiteProfiles Protein kinase domain profile. 66 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0802 351 SMART serkin_6 66 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0802 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Alju13g0802 351 FunFam Mitogen-activated protein kinase kinase 6 147 346 - -
Alju13g0802 351 FunFam Mitogen-activated protein kinase kinase 6 36 145 - -
Alju13g0802 351 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 331 - -
Alju13g0802 351 Pfam Protein kinase domain 69 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0802 351 CDD PKc_MAPKK_plant_like 81 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0802 Alju-ChrAlju13 25380417 25388600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0802 1 322 MAP Kinase Kinase Gene Family AT4G29810 65.075 1.11e-162 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Alju13g0802 Pkinase 5.6e-72 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0802 13 25380417 25388600 Alju13g0802 13 25380417 25388600 ECH