Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0780 ATGCAGGTGGGTAATCCAGAAACGGAAAATTATTATGATTATAAAGGCCTTCTAGAATATGCATGGAGCCATGCAGTCATATCAGATCAAGAATATGAGAAAGCAAAAAATGTTTGTGATTTCAAGCAATTTTATTGGTCTGATGAATGCAATGAGGCCATGAATTTGGTCTTCCGAGATTACAGGGAGATAGATATTTACAACATTTATGCTCCGGCATGTCGCCTAAATAGTACTTCCTCCATGGTTCCTGAGGGGATAAATGATTACAGACTGAGGAGGATGAGGCTTTTTGGAGGCTACGACCCATGTTATTCCACTTATGCAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTAATGTCAAAGGAGGGAACACTAGTGTAGCGTGGAAGACTTGCAATAACTCCATATTAAATACATATAACTTCACCGTCTTCTCTGTCCTTCCCATCTACACAAAACTTATCAAGGGTGGTCTCAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCTGTGATAGGGACAAGATATTGCGTTGAGGCTCTTGGATTGCCCCTCAAGTCTAGCTGGCGAACTTGGTACCATGATAATCAGGTGGGAGGAAGGATAGTGGAGTATGAAGGGTTAACATATGTGACAGTGAGAGGAGCTGGTCATTTGGTTCCACTCAACAAGCCCAGTGAAGCTCTTTTCCTCATTCATTCTTTCCTCACAGGACAGAACCTCCCTCCTCATCCATGA 765 0.4209 MQVGNPETENYYDYKGLLEYAWSHAVISDQEYEKAKNVCDFKQFYWSDECNEAMNLVFRDYREIDIYNIYAPACRLNSTSSMVPEGINDYRLRRMRLFGGYDPCYSTYAEEYFNRIDVQSSFHANVKGGNTSVAWKTCNNSILNTYNFTVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCVEALGLPLKSSWRTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALFLIHSFLTGQNLPPHP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0780 254 Gene3D - 104 142 - -
Alju13g0780 254 ProSitePatterns Serine carboxypeptidases, histidine active site. 217 234 IPR033124 GO:0004185
Alju13g0780 254 FunFam Carboxypeptidase 101 250 - -
Alju13g0780 254 SUPERFAMILY alpha/beta-Hydrolases 3 251 IPR029058 -
Alju13g0780 254 FunFam Carboxypeptidase 153 247 - -
Alju13g0780 254 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 234 IPR001563 GO:0004185|GO:0006508
Alju13g0780 254 Gene3D alpha/beta hydrolase 1 84 IPR029058 -
Alju13g0780 254 Gene3D - 153 247 - -
Alju13g0780 254 Pfam Serine carboxypeptidase 2 246 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0780 Alju-ChrAlju13 25100170 25102755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0780 135 250 Calmodulin-binding Proteins AT2G22960 31.624 8.71e-16 71.6