Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0737 ATGGCTTCATCTTCTTCCTTGTTCATAATAAAGCCATTTCTTTGTTTCATCGTGTTGTTCTTGGCAGCATGCCCTAGTTATGTTCTTGGGTTCACTGAGCTCAAAGATATTGTAATAGATTCTCCTCTTTTAACCAAAAATATTCCGGCAAATCGAACCATCAAGGTCGATGATGATGGCGACGGAGAATTTACATCCATTCAAGCTGCCATAGATTCTATTCCTGAAGGAAATTCTCAGTGGGTCATCGTTCATGTCAGGAAAGGAGTATACAGAGAGAAGGTGACGATACCAAAGAACAAACCATATATATTCTTGAGAGGAAATGGGAGAGGGAGAACTGCCATAGTTTGGTCTCAGAGTTCTGCTGATAATATAGAGTCTGCAACTCTCAAAGTCGAAGCTCATAACGTTGTCGTCTTTGGAATCAGCATCAAGAATGAGGCACCTACTGGGGTGGCTTATACTTCGCAGAATCAGTCAGTGGCAGTATTTGTAGGAGCAGATAAAGTGGCGTTCTATCATTGTGCGTTCTATAGCACTCACAACACTCTCTTTGATTACAAAGGCAGACATTACTATGATGAATGTTACATTCAAGGTTCTATTGATTTCATCTTTGGCCGTGGCAGATCCCTCTTCCATAAATGTGAGATATTTGTGATAGATGACAAGAGGACGCCGATAAAGGGGTCAATCACAGCACAAAATAGAGAGTCAGAATCAGAGAAAAGTGGGTTTGTGTTTGTGAAGGGAAAGATATATGGCATAGGAGGGGTTTACTTGGGAAGAGCCAAAGGTTCTCATTCAAGGGTCATCTTTGCCCAAGTCTATCTCTCTGCTACCATTGTTCCTGAGGGCTGGGCCCACTGGAGTTATGCCGGCTCCACCGAGAACTTATACCATGGTGAGTACAAGAACTTTGGACCTGGGGCTAACACAACAAAACGAGCTAGTTGGGCCAAACAGCTTACTGATAAAGAAGTCGAACCCTTCATGTCTGTGGAATACATTGATGGCCAAGATTGGCTTCCTGCTTGGCTATAA 1047 0.4288 MASSSSLFIIKPFLCFIVLFLAACPSYVLGFTELKDIVIDSPLLTKNIPANRTIKVDDDGDGEFTSIQAAIDSIPEGNSQWVIVHVRKGVYREKVTIPKNKPYIFLRGNGRGRTAIVWSQSSADNIESATLKVEAHNVVVFGISIKNEAPTGVAYTSQNQSVAVFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGRSLFHKCEIFVIDDKRTPIKGSITAQNRESESEKSGFVFVKGKIYGIGGVYLGRAKGSHSRVIFAQVYLSATIVPEGWAHWSYAGSTENLYHGEYKNFGPGANTTKRASWAKQLTDKEVEPFMSVEYIDGQDWLPAWL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0737 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 344 - -
Alju13g0737 348 Pfam Pectinesterase 54 340 IPR000070 GO:0030599|GO:0042545
Alju13g0737 348 SUPERFAMILY Pectin lyase-like 49 346 IPR011050 -
Alju13g0737 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Alju13g0737 348 Gene3D - 48 347 IPR012334 -
Alju13g0737 348 FunFam Pectinesterase 48 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0737 Alju-ChrAlju13 24438607 24441144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0737 7 344 Carbohydrate Esterase AT5G47500 35.632 1.66e-73 230