Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0717 ATGCGGCCGCTTCACTGTGGATTAGCCTCTCCCTCTCTCTTCCCCTTCCTTTGTTTTACGAGCGCACGGTTGCTCTGCAGAGTCCTGCTTCTTCTTCTTTTCTCTTGCTTCTTTTTTCTGTTCATGGAGCTTCAGAGGCGCCAAGATCAAGGCTTCTCTGAGAGGAAAGGACTGAAGCGGAAGCTGGAGGAGGAATTGGAAGAGGAGTCTGAGATCTCAGCTCCACCGCCCACCGGCGACGTCCGTGAGGCGCTGCTCGCCGAGGTGAAGGCTCAGGTTGACGTCCTCGAATCCACTTTCTCATGGATGGAATCCGATCGAGCCGCGGCTAAGCGCGCTGCTCACGTCCTAGCTGAGCTTGCTAAGAATGAAGAAGTAGTGAACGTGATTGTTGAAGGAGGTGCAATTCCGGCTTTGGTTAAGCATCTTCAACCGCCTCCTTCGAGTGAAGACGATCCTGGTCAGAAGCCATTTGAGCACGAGGTTGAGAAAGGGAGTGCTTTTGCCCTGGGACTTCTTGCCGTCAAGCCAGAACATCAACAGCTCATTGTTGACAATGGTGCCTTAAAACATCTTGTTGATCTGTTGAAGAGGCATAATAGTAGCCCCACTTCTCGTGCTGTGAATAGTGTCATTCGCAGGGCTGCAGATGCGGTCACTAATCTTGCTCATGAAAACAGTAACATCAAAACCTGTGTCAGGATGGAAGGTGGGATTCCACCTCTTGTTGCGTTGCTTGGATTCACTGATACAAAGGTTCAAAGAGCAGCTGCTGGTGCACTGCGTACTCTAGCTTTCAAAAATGATGAAAATAAAAATCAGATTGTCCAATGGAATGCTCTGCCAACTCTGATTCTAATGCTCCGTTCTGAAGATCCTGCCATTTATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTGCACTCTTCTCCTAATATAAAGAAAGAAGTTATTCAAGCTGGAGCTTTGCAACCCGTAATTGGATTGCTTCGCTCTTGCTGCTCTGAGAGCCAAAGGGAAGCAGCATTGTTGCTTGGACAGTTTGCAGCTACTGATTCTGACTGCAAGCTTCATATTGTTCAGAGAGGTGCTGTTCCACCTCTGATAGAGATGCTTCAATCCGATGATGTACAACTCAAAGAAATGTCTGCCTTTGCCTTGGGGCGATTGGCACAGGACATGCATAATCAAGCTGGTATTGCATACAATGGTGGCTTAGAGCCATTACTTAAGCTTCTTGATTCAAAAAATGGGGCTTTGCAACATAATTCAGCTTTTGCACTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGTGTTCAGAGACTGCAGGATGGAGAGTTTATTGTTCAGGCGACAAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAGGAAAAGATTCATGGCCGTGTCCTGAATCATTTGTTATATCTTATGCGAGTTTCAGACAAGGCTGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTGTGCGGGTCATCAGAGATTAATATTCATTGATAACAATGGTTTGGAGTTGCTTATTGGGCTTCTTGGTTCTTCTAGCACAAAGCAGCAACTTGATGGTGCTGTAGCATTATGCAAGTTGGCCAAGAAAGCCATGACTCTATCTTCTATAGATGCTGCTCCCCCATCTCCAACACCTCAGGTCTATTTGGGGGAGCAGTATGTTAACAATTCTACATTGTCCGATGTTACATTTTTGGTTGAAGGGAAGCGGTTTTATGCTCACAGAATCTGCCTTCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAGGGATATTGAAATCCCAAATATAAGATGGGAGGTTTTTGAACTAATGATGAGATTCATCTATACTGGATCAGTTGATGTTACTCAGGACATTGCTCAAGATCTCCTTCGAGCAGCTGATCAATATCTCCTAGAAGGACTTAAGAGACTTTGTGAGTACACAATTGCGCAGGATATATCGCTTGATAATGTGTCAAGTATGTATGAACTTTCAGAAGCCTTTAATGCAATATCGTTGAGGCACTCCTGCATCGTTTATATCCTAGAGCAGTATGATAAACTGTGTTCCAAGCCAGGGCACTCTCACATGATTCAACGAATAATGCCAGAAATGCGCAACTACTTTACAAAAGCGCTTACGAAGGCTAACTCTGTTACCGTTATTGCTCCATCGTAG 2250 0.4493 MRPLHCGLASPSLFPFLCFTSARLLCRVLLLLLFSCFFFLFMELQRRQDQGFSERKGLKRKLEEELEEESEISAPPPTGDVREALLAEVKAQVDVLESTFSWMESDRAAAKRAAHVLAELAKNEEVVNVIVEGGAIPALVKHLQPPPSSEDDPGQKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHNSSPTSRAVNSVIRRAADAVTNLAHENSNIKTCVRMEGGIPPLVALLGFTDTKVQRAAAGALRTLAFKNDENKNQIVQWNALPTLILMLRSEDPAIYYEAVGVIGNLVHSSPNIKKEVIQAGALQPVIGLLRSCCSESQREAALLLGQFAATDSDCKLHIVQRGAVPPLIEMLQSDDVQLKEMSAFALGRLAQDMHNQAGIAYNGGLEPLLKLLDSKNGALQHNSAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSDKAVQRRVALALAHLCCAGHQRLIFIDNNGLELLIGLLGSSSTKQQLDGAVALCKLAKKAMTLSSIDAAPPSPTPQVYLGEQYVNNSTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTQDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLDNVSSMYELSEAFNAISLRHSCIVYILEQYDKLCSKPGHSHMIQRIMPEMRNYFTKALTKANSVTVIAPS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 272 IPR000225 GO:0005515
Alju13g0717 749 Gene3D - 61 396 IPR011989 -
Alju13g0717 749 SUPERFAMILY POZ domain 571 674 IPR011333 -
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 363 405 IPR000225 GO:0005515
Alju13g0717 749 ProSiteProfiles BTB domain profile. 580 647 IPR000210 GO:0005515
Alju13g0717 749 CDD BTB_POZ_ARIA_plant 567 682 - -
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 404 446 IPR000225 GO:0005515
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 134 188 IPR000225 GO:0005515
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 187 237 IPR000225 GO:0005515
Alju13g0717 749 Pfam BTB/POZ domain 573 675 IPR000210 GO:0005515
Alju13g0717 749 SMART arm_5 507 548 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 352 392 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 226 266 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 176 224 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 310 350 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 123 175 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 393 433 IPR000225 GO:0005515
Alju13g0717 749 SMART arm_5 268 308 IPR000225 GO:0005515
Alju13g0717 749 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 279 321 IPR000225 GO:0005515
Alju13g0717 749 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 42 741 IPR044282 -
Alju13g0717 749 SMART BTB_4 580 677 IPR000210 GO:0005515
Alju13g0717 749 SUPERFAMILY ARM repeat 478 550 IPR016024 -
Alju13g0717 749 Gene3D - 397 559 IPR011989 -
Alju13g0717 749 SUPERFAMILY ARM repeat 94 451 IPR016024 -
Alju13g0717 749 Gene3D Potassium Channel Kv1.1; Chain A 560 706 IPR011333 -
Alju13g0717 749 Pfam Armadillo/beta-catenin-like repeat 352 391 IPR000225 GO:0005515
Alju13g0717 749 Pfam Armadillo/beta-catenin-like repeat 230 265 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0717 Alju-ChrAlju13 24252389 24260255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0717 279 550 U-box Gene Family AT3G46510 23.843 1.01e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju13g0717 BTB 2e-26 CL0033