Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0711 ATGATGGCGAATCATTTCCAGAGCGGTATTGAAACAGCGAAGCTCGTTTGGTCGCGAATTCCGAACTCGGAGTCGGAGGAACCCCAGGACTCGGAAGACCCCGTTGGATTGTTGAAGAAGAGTGATGGAAGGGGCGTCGAGAGCCTTGACTATGAAGTGATAGAGAATTATGCTTATCGGGAAGAACAGGCGCTAAGAGGGAAGCTGTATGTGGGCTATTTGTTGGTGGTGAAATGGTTCTTTGCTTTGCTCATAGGCATTGGTACTGGAATTGCTGCTGTTTTCATCAATATATCTGTTGAAAACTTCGCTGGCTGGAAGTTTTCACTGACATTTCATATAATTCAGAAATCCTATATTGCGGGCTTTCTTGTATATGTCCTGATCAACTTGGTTTTGGTCTATTCCTCTGTATATATTATCACACAATTTGCTCCAGCAGCAGCTGGATCTGGTATTCCTGAAATTAAGGGTTACTTAAATGGAGTTGATAGTCATGGCATCCTTCTTCTCAGAACCTTGATTGGAAAGATATTTGGAAGCATTGGTTCAGTCGGAGGTGGCCTTGCTTTAGGTAAAGAAGGCCCTCTTGTGCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGATCTACCAAGTATCATCTAAATTCTAGGTGGTGTCAAGTATTCAAAAGTGATCGGGATCAGCGAGATCTTGTAACCTGTGGGTGTGCGGCTGGAGTAGCTGCTGCATTTAGAGCTCCAGTTGGTGGTGTTTTGTTTGCATTGGAAGAGGTAACATCATGGTGGAGAAGTCAATTGATGTGGCGTGTCTTCTTCACTTCTGCTGTTGTGGCTGTTGTAGTGCGTACTGCAATGGGGTGGTGTAAGAGTGGAAAGTGTGGACATTTTGGCTCGGGTGGATTCATCATTTGGGATATATCAGGTGGTCAAGAGGATTATTCCTTTGCTGAGTTACTGCCAATGGCTGTTATTGGGGTTATTGGAGGACTGCTAGGGGCCTTGTTTAATCAGCTTACTCTTTATATGTCTTCTTGGCGTCGAAATCATCTGCACAAGAAAGGGGGCCGAATCAAGATCATCGAAGCATGCCTTGTCTCCTTGTTAACTTCGGTTATTTCATTTGGTTTGCCACTCCTAAGAAAATGTAGTCCGTGCCCTGAATCTGATCCTCATTCCGATTCTACTATTGAATGTCCTCGACCACCTGGAATGTATGGGAATTATGTAAATAGTATGCAAGAGGAAGGAGCACACTCCTGA 1272 0.4442 MMANHFQSGIETAKLVWSRIPNSESEEPQDSEDPVGLLKKSDGRGVESLDYEVIENYAYREEQALRGKLYVGYLLVVKWFFALLIGIGTGIAAVFINISVENFAGWKFSLTFHIIQKSYIAGFLVYVLINLVLVYSSVYIITQFAPAAAGSGIPEIKGYLNGVDSHGILLLRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWCQVFKSDRDQRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISGGQEDYSFAELLPMAVIGVIGGLLGALFNQLTLYMSSWRRNHLHKKGGRIKIIEACLVSLLTSVISFGLPLLRKCSPCPESDPHSDSTIECPRPPGMYGNYVNSMQEEGAHS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0711 423 SUPERFAMILY Clc chloride channel 56 383 IPR014743 -
Alju13g0711 423 Gene3D Clc chloride channel 72 398 - -
Alju13g0711 423 PRINTS Plant CLC chloride channel signature 276 286 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju13g0711 423 PRINTS Plant CLC chloride channel signature 52 60 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju13g0711 423 PRINTS Plant CLC chloride channel signature 262 270 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju13g0711 423 PRINTS Plant CLC chloride channel signature 294 301 IPR002251 GO:0005247|GO:0006821|GO:0016020
Alju13g0711 423 MobiDBLite consensus disorder prediction 23 42 - -
Alju13g0711 423 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 30 416 - -
Alju13g0711 423 PRINTS Chloride channel signature 177 196 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0711 423 PRINTS Chloride channel signature 241 260 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0711 423 PRINTS Chloride channel signature 146 163 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0711 423 Pfam Voltage gated chloride channel 136 381 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0711 423 FunFam Chloride channel ClC3 70 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0711 Alju-ChrAlju13 24150374 24154667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0711 1 414 Ion Channels AT5G26240 82.734 0.0 647