Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0710 ATGGCCTACAGCCCTCTAATTCCAAGGAGGGTGGTCAGATTCTTCTGCAGCAAAGACAAGGAATACAATGATCTTGCCACAATCTTCTTCAATACACAGGATGACGCCATAAGGAATTTGTTTAGTGCGAAAACAATACATGAGTACAGTCCCCAAAGTTTATTGACCTTTTTGGTAATGTTTTATACTCTAGCAGTTGTAACATTTGGTACAGCAGTTCCAGCTGGTCAATTTGTTCCCGGAATCATGATAGGATCAACATATGGACGTCTTGTTGGCATGTTTGTTGTAAAATATTATGGAAAGCTCAACATTGAAGAGGGAACGTATGCTTTATTGGGAGCTGCATCTTTTCTTGGAGGGTCAATGCGAATGACGGTGTCTCTCTGTGTCATTATGGTTGAAATAACAAATAACTTACAGCTGTTACCTCTTATTATGCTTGTTCTCCTTATATCCAAGGCTGTCGGTGATGCTTTTAATGAGGGCTTCTATGAAGAGCAGGCACGACTTAAGGGAATTCCATTGCTGGAATCAAGGCCTAAATATGAGATGCGGAATATGACAGCAAAGGAGGCCTGTGGGAGCAGAAGGGTGGTTTCTTTCCCTCGTGTTGTCAAGGTTGCAGATGTAGTTTCCATTCTGCGGAGCAATGATCACAATGGTTTTCCTGTCATTGATCACACAAGAAATGGAGAATCACTTGTTACTGGATTAGTGCTTCGGAGTCATCTATTGGTAATTCTGCAGTCAAAGATTGATTTCCAGCATATTCCTATACCTGGTGATACCAGAGGCATGGCCAACCCGATAAGGCACCATTCTGATGAATTCACTAAGCCTGTTTCTAGTCAAGGATTCCATATCGATGATATACATCTAAGTTCAGATGACTTAGAAATGTACATAGATCTTACCCCATTTTTGAACCCCTCACCATATATTGTACCCGAAGATATGTGTTTGACAAAGGTCTACAATCTTTTCCGCCAACTAGGTTTGAGGCATTTATTTGTTGTTCCGCGACCATCTCATGCTCTTGGTTTGATAACCAGAAAAGATCTGTTGATTGAGGACACCAAAAATGTAAATACAATACAGCTCCAATCAACTAGCACATTGTCTTTATGA 1131 0.4076 MAYSPLIPRRVVRFFCSKDKEYNDLATIFFNTQDDAIRNLFSAKTIHEYSPQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYGKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLQLLPLIMLVLLISKAVGDAFNEGFYEEQARLKGIPLLESRPKYEMRNMTAKEACGSRRVVSFPRVVKVADVVSILRSNDHNGFPVIDHTRNGESLVTGLVLRSHLLVILQSKIDFQHIPIPGDTRGMANPIRHHSDEFTKPVSSQGFHIDDIHLSSDDLEMYIDLTPFLNPSPYIVPEDMCLTKVYNLFRQLGLRHLFVVPRPSHALGLITRKDLLIEDTKNVNTIQLQSTSTLSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0710 376 SUPERFAMILY Clc chloride channel 30 179 IPR014743 -
Alju13g0710 376 CDD CBS_pair_voltage-gated_CLC_euk_bac 196 356 - -
Alju13g0710 376 Gene3D - 184 363 IPR046342 -
Alju13g0710 376 ProSiteProfiles CBS domain profile. 309 366 IPR000644 -
Alju13g0710 376 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 11 361 - -
Alju13g0710 376 FunFam Chloride channel protein 301 375 - -
Alju13g0710 376 Pfam CBS domain 197 249 IPR000644 -
Alju13g0710 376 Gene3D Clc chloride channel 12 178 - -
Alju13g0710 376 Pfam Voltage gated chloride channel 29 157 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0710 376 SMART cbs_1 198 250 IPR000644 -
Alju13g0710 376 SMART cbs_1 312 360 IPR000644 -
Alju13g0710 376 SUPERFAMILY CBS-domain pair 182 356 IPR046342 -
Alju13g0710 376 PRINTS Chloride channel signature 164 178 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0710 376 PRINTS Chloride channel signature 73 93 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0710 376 PRINTS Chloride channel signature 126 145 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Alju13g0710 376 PRINTS Chloride channel signature 108 124 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0710 Alju-ChrAlju13 24146364 24150338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0710 12 376 Ion Channels AT5G26240 80.274 0.0 583