Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0680 ATGGAACCGGGCGTGAGATCAGCTGGCCATTCCGGGGTTTTAGTGAATAATAGAAACTCCTCAGGCTGTTTAATTGTTAAAAAGAAAGGAGATGGATTGGGTGGTGGATTTACTTCTTCGAACAGTTCGCGGAAGCTGTATGAATCAAAAGTTAGGAAAAGGTCCAGTGTGGCTAAGATTGATTCAGAATCAAGTGACGAGTTGCCGATGCCTACAGTGAGAAGGCTTGGTTCTGAGACTATTCGTGTCTGTAATGGGTTGACTGCTTTTGAGCGGGGTATAGGAGAAAGGAGTGAAACTGGTAGAAAGAGGGATAGAACGGAGCAAATCAGACGTGATGAGGATTCTGTGTTTGATAAAAATGGTTTGGAGCAGAGGGAAACAAAGAGGAATAAGCTGGACGTGTTTGATTTTGATGAATATGATGGTTTCGATGCGCAAATGACTCAAAGGAGGAAGTCTCATGATGATAATGGAGTTAGTTTTGGAGGAAGAAGGTTTAGGGAACCGATGCATGAAGCTTCTAGTGGCATTGAGAGGGAATTTGAAACAGGGTCAAGTAGTCACATTGTTTATAGTAGAAAGAATTCTTATTATGGCAGGGCTAGGGACTTGGATCTAGGAGATAATATTAGTCAAAGCAGGTTAAAAACAAATGGGGTACCTCTGTCTTTGCTGAAAAATAAGTTTAAATCAGATGAATCCATCAGGGTTCAGGGGAAAAATGGTGTTCTAAAGGTGATGGTTAATAAGAAGAAGGCTAGCCCATCAGAGCACTATGGTCATCGCAAACCTATGGAAAGAAGACAGAGTTTGAGGACTGAGGCCACTGCCAAGAAGAACACCTTGGCCCATCCTTCATCGTACTCAAAAACAAAACTTATTCACAAGCCGGGTTTAGCTGTTAGACAAGAGAAAAGACGGATAGTATCAAAAAACTCATTTTCAACTAAGGACAATAAGGGTCGTGTTTGGGATACAGAGGACAGTGACTCATCATCGAATCAGGAGTTAGAAACTACTAAATCTCGCAAGTCTTTGAAGAGGGCGGGTTCTGAGGATGAACAGACTCCTTTGCGGCAGAAAGTCCCAACTAAAATCATGAAAGAAGGAAAAGTGAGGCGGGGTAGTGGCACCGCAAAACAGAAGCTGCGAGAAAAATTAAGGGAGATGTTACTGAGTGCAGGATGGACTATAGATTATCGGCCTCGAAGGAATAGAGACTATCTGGATGCAGTTTACATTAATCCAGGGGGTACGGCCTATTGGTCTATCATCAAAGCCTATGATGCTCTGCAAAAGCAATTGAATGATGATGATGAGGCCAAGCCCATGGGTGGCAGTTCTTCCTTTGCTCACATCTCAGATGAGGTGTTGAGTCAATTGACGAGGAAAACTCAGAAAAAGATGGAGAAAGAATTGAAGAAGAAGAAAATTTATGGTAGTGAGAGTGAGAGTGATAGTGAAAAAGAACCCATCCATAAAAGATATTCCAGTGGCAAGCATGATATGAATAGCATGGATAGTGATGGTGATGAAGAGAAATTAAGCTCTTTTATAAAGCAGGGAAGTAAGTCAATGAAAACTAAGATGACGGAAAATGTTGTTGCCAGTGCTAGCTTAAAATCCCAGAAATCTACCCTTCGCATCCATGATGAAACTGACAATTCATTGTCTGAATGTGATCCTCATCAGTCACATGGGAGGAAAAGTAGAAAACTTGGAAGATGTACTTTGTTTGTTCGGACTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGATTTGTTCCGTACACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTGGCATTGAGCCAACAGGTTCAGTATCGGAGACGAAAACGAGTAATGCTGGAGGGATGGATTGCAAATGATGGCATTCATTGTCGCTGCTGCAGTAAAATCCTCACTATTGCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCGCCAGCCATTTCAAAACATATATTTGGATTCGGGAGTTTCTCTTCTACAGTGTCAAATAGATGCATGGAATAGACAAGAGAATTCTCATAAAATGAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAATGATGACACTTGCGGTATATGTGGAGATGGTGGGGCCTTAATCTGTTGTGATGGTTGTCCATCAACATTTCACCAGAGCTGCTTGTGTATTCAGATGCTTCCTCCTGGTGAATGGCATTGTCCAAATTGCACCTGCAAATTTTGTGGAATAGCCAGTGGGACTTTTAAAAAAGGAGGTGCTGCTGGATATGCACTACTCACTTGCAACTTATGTGAGAAAAAATACCATGAATCTTGTGCTGAGGAGATGGATGCCCTTTCTATTAACTCCAATATACTGGGCTTTTCTTTTTGTGGGAAAGAGTGCAAACAGCTTTTTGAGCATTTGAAGAAGTACCTAGGTACCAAGCATGAGCTAGAGGCAGGATTTTCATGGTCTCTTACTCATAGAACTGACAATGACTCAGAGGCAGCTAATAGGGGAATTTTTCAAAGGGTGGAATGCAACTCCAAGCTAGCAATTGCACTGACTATCATGGATGAATGTTTTTTACCTGTTGTTGACCGGAGGAGTGGGATCAATTTAATTCATAATGTTTTATATAATACTGGGTCAAACTTCAGTAGGTTGAACTATAATGGTTTTTACACTGCTATTTTGGAGAGGGGTGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAGACTAGTGGAGATGCCATTTATTGGAACTCGCCATATATATAGGCGTCAGGGCATGTGCCGCCGGCTTTTTTCTGCAATTGAATCGGCCCTCCGCTCTATGAAGGTTGAGATAATGATTATTCCAGCAATCGCTGAGCTCATGCAAACATGGACAACGAATTTTGGCTTCACACATCTTGAGGAATCACTGAAGCAAGAACTGAGGTTTTTGAATATTCTGGTGTTCCCTGGGATAAATATGCTACAGAAGGTGCTAGTAGAGAAAGGTGTTGAGAAAATGGAAAATGGAGATGAAGTTAGTATCAAGCCAAAATTGGCGGATAGGTCAGATGATTCCTCAAATCAACAAGACCCTGATGGAAGTGATAACGCTGATTCAAATCCTGTCAATGAGATAAATGATGAATGTATCGATGCTTCTCAAGAGATGAAAGATCAGGTTTTATCTGACAGGACCGTGTGCTCCAAATCTAATTCCGAGGATAGGCTATATGACTCAGCTGCAGATAAATGTTCTTCTCCCTCTAGTACAAACCATGTTGCACTGGAGATGGAAAATCCTGTGGAAGATAATTTGAATGCATCTGGCAAAAGTCAGGTCATTTCTCTGAATGATACTTCCATTGATGTACATCGGGCAAATGCTCCGGATTGCCCTGAAAATAGTACTTTGGTTCCAGAAACTGCTCCCTCTGATCCTAATTTGACAGGAGACCTGGTTGAGCCTGTTTCTGATCAGAAAAGTCACTTGCCCACTGCTGTAAATGGTGATTCATCTGAGAATGAGATGAACCCGGCGGTGGATAATATTGTGTCGCCTGGAGAGGTTGGCATGAATAATACTCAAGAGGTTCATAAGGTTGTTCCTTCAGGTGGGTTATCTGAAGAAAATATTGCCACACGGAGCTCTGATTCTATTCTCAGTCATGCTGATGAGAGTTCCTTGCAAATCAGTTCAGGTTTGAATAGTGAAACTGTGTGCCAAGAAAGAAACTTACACGTACACGTAGGCACAGAAGTTGCTTCAAAAAATAAGCCTTCTGATGAAAATGGCATCAATGCATCCAATGATTGTTCTGAGACTGATCAAGAGTAA 3867 0.4169 MEPGVRSAGHSGVLVNNRNSSGCLIVKKKGDGLGGGFTSSNSSRKLYESKVRKRSSVAKIDSESSDELPMPTVRRLGSETIRVCNGLTAFERGIGERSETGRKRDRTEQIRRDEDSVFDKNGLEQRETKRNKLDVFDFDEYDGFDAQMTQRRKSHDDNGVSFGGRRFREPMHEASSGIEREFETGSSSHIVYSRKNSYYGRARDLDLGDNISQSRLKTNGVPLSLLKNKFKSDESIRVQGKNGVLKVMVNKKKASPSEHYGHRKPMERRQSLRTEATAKKNTLAHPSSYSKTKLIHKPGLAVRQEKRRIVSKNSFSTKDNKGRVWDTEDSDSSSNQELETTKSRKSLKRAGSEDEQTPLRQKVPTKIMKEGKVRRGSGTAKQKLREKLREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDDEAKPMGGSSSFAHISDEVLSQLTRKTQKKMEKELKKKKIYGSESESDSEKEPIHKRYSSGKHDMNSMDSDGDEEKLSSFIKQGSKSMKTKMTENVVASASLKSQKSTLRIHDETDNSLSECDPHQSHGRKSRKLGRCTLFVRTSSKGLNSESGGFVPYTGKRTVLSWLIDSGTVALSQQVQYRRRKRVMLEGWIANDGIHCRCCSKILTIAKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNRQENSHKMSYHSVDIDGDDPNDDTCGICGDGGALICCDGCPSTFHQSCLCIQMLPPGEWHCPNCTCKFCGIASGTFKKGGAAGYALLTCNLCEKKYHESCAEEMDALSINSNILGFSFCGKECKQLFEHLKKYLGTKHELEAGFSWSLTHRTDNDSEAANRGIFQRVECNSKLAIALTIMDECFLPVVDRRSGINLIHNVLYNTGSNFSRLNYNGFYTAILERGDEIISAASIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIESALRSMKVEIMIIPAIAELMQTWTTNFGFTHLEESLKQELRFLNILVFPGINMLQKVLVEKGVEKMENGDEVSIKPKLADRSDDSSNQQDPDGSDNADSNPVNEINDECIDASQEMKDQVLSDRTVCSKSNSEDRLYDSAADKCSSPSSTNHVALEMENPVEDNLNASGKSQVISLNDTSIDVHRANAPDCPENSTLVPETAPSDPNLTGDLVEPVSDQKSHLPTAVNGDSSENEMNPAVDNIVSPGEVGMNNTQEVHKVVPSGGLSEENIATRSSDSILSHADESSLQISSGLNSETVCQERNLHVHVGTEVASKNKPSDENGINASNDCSETDQE 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1081 1101 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 28 71 - -
Alju13g0680 1288 CDD PHD2_CHD_II 710 749 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1020 1055 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1267 1288 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 463 525 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1262 1288 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1020 1039 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 463 519 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1172 1187 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1166 1187 - -
Alju13g0680 1288 SUPERFAMILY FYVE/PHD zinc finger 698 756 IPR011011 -
Alju13g0680 1288 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 896 986 IPR016181 -
Alju13g0680 1288 SMART PHD_3 751 809 IPR001965 -
Alju13g0680 1288 SMART PHD_3 709 750 IPR001965 -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 278 364 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 253 272 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 298 330 - -
Alju13g0680 1288 ProSiteProfiles Zinc finger PHD-type profile. 707 752 IPR019787 -
Alju13g0680 1288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 797 IPR013083 -
Alju13g0680 1288 PANTHER PHD FINGER PROTEIN 12 336 1111 IPR042163 GO:0003714|GO:0045892
Alju13g0680 1288 MobiDBLite consensus disorder prediction 46 61 - -
Alju13g0680 1288 Pfam Tify domain binding domain 632 682 IPR032308 -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 1040 1055 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 95 123 - -
Alju13g0680 1288 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0680 Alju-ChrAlju13 23704644 23713128 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0680 1 1010 PHD Transcription Factor Family AT4G14920 48.980 0.0 878