Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0639 ATGAAGGGTTTTGTAGGCGGAGAAGGAGGTGTTGGAACACCAAAGATGGATTTGGAAGCAGGGACTCTGGATTCTAGGATGAAGGGTGTTGGGAACATTAGCAGTAATGATAAAATTTTCAGAGCTGATAAGATTGATCTCAAAAGTTTGGATGTGCAGCTTGAAAAGCACTTGAGCAGGGTTTGGTCCAGGAACATTGAGTCCAAAAGGCCTAAAGAAGAATGGGAGATTGATTTGGCCAAATTGAATCTCCGATACGTTGTAGCTCATGGGACCTATGGTACTGTTTATAGAGGCACCTATGATAACCAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGAGGATGGTGTCGCCACAGCTGCTGAAACTGCTACTTTACGTGCGTCATTTCAGCAGGAGGTTGCTGTTTGGCACAAACTTGACCATCCAAATGTTACAAAATTTGTTGGAGCTTCAATGGGAACCTCAAATCTTAAAATTCCCACAAAGAACTCTGATTGCCAAGAGCCCCTTCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTATATCCCTTGTGGGACACTAAAACAATTATTGTTCAGAAATAGGCATAAGAAACTTACTTTCAAAGTTGTGATCAAGCTGGCTTTAGATCTTGCCAAGGGTCTCAGCTATCTACATTCAAAGAAGATTGTACATCGTGATGTCAAAGCAGAGAATATGTTGCTAGATCGCGGTGGAAACTTGAAAATAGCCGATTTTGGAGTCGCACGAGTTGAAGCACAAAATCCAAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCAGAGGTTTTGGATGGTAAGCCTTACAACAGAAGATGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAAATATATTGCTGTGATATCCCTTATCCAGATCTTAGTTTTGCTGATGTGTCATTGGCAGTTGTCCGTCAGAATTTGCGACCAGAAATCCCGCGATGTTGTCCAACATCTTTGGCTAATATCATGAGGAAATGTTGGGATGGGAACCCAGACAAGCGTCCAGAAATGGGCGAGGTGGTGAGTTTTCTGGAAGCCATAGATACAAGCAAAGGAGGAGGAATGATACCAGAAGATGCCTTACCCAAGTGCTTCTGTTTTGCCCCATCTCGTGGTCCCTAA 1164 0.4347 MKGFVGGEGGVGTPKMDLEAGTLDSRMKGVGNISSNDKIFRADKIDLKSLDVQLEKHLSRVWSRNIESKRPKEEWEIDLAKLNLRYVVAHGTYGTVYRGTYDNQDVAVKVLDWGEDGVATAAETATLRASFQQEVAVWHKLDHPNVTKFVGASMGTSNLKIPTKNSDCQEPLPSRACCVVVEYIPCGTLKQLLFRNRHKKLTFKVVIKLALDLAKGLSYLHSKKIVHRDVKAENMLLDRGGNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDIPYPDLSFADVSLAVVRQNLRPEIPRCCPTSLANIMRKCWDGNPDKRPEMGEVVSFLEAIDTSKGGGMIPEDALPKCFCFAPSRGP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0639 387 Gene3D Transferase(Phosphotransferase) domain 1 184 368 - -
Alju13g0639 387 Pfam Protein tyrosine and serine/threonine kinase 84 358 IPR001245 GO:0004672|GO:0006468
Alju13g0639 387 PRINTS Tyrosine kinase catalytic domain signature 219 237 IPR001245 GO:0004672|GO:0006468
Alju13g0639 387 PRINTS Tyrosine kinase catalytic domain signature 329 351 IPR001245 GO:0004672|GO:0006468
Alju13g0639 387 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Alju13g0639 387 PRINTS Tyrosine kinase catalytic domain signature 181 194 IPR001245 GO:0004672|GO:0006468
Alju13g0639 387 SMART serkin_6 82 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0639 387 FunFam Kinase suppressor of Ras 1 71 166 - -
Alju13g0639 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Alju13g0639 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 361 - -
Alju13g0639 387 ProSiteProfiles Protein kinase domain profile. 82 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0639 387 Gene3D Phosphorylase Kinase; domain 1 71 165 - -
Alju13g0639 387 CDD STKc_MAP3K-like 88 358 - -
Alju13g0639 387 SUPERFAMILY Protein kinase-like (PK-like) 63 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0639 Alju-ChrAlju13 23074296 23077606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0639 31 387 MAP Kinase Kinase Kinase AT3G22750 79.330 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju13g0639 PK_Tyr_Ser-Thr 1.6e-59 CL0016