Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0636 ATGCTTAGGTGGCACAATCGTGGCAACGAAGGGGTTATCCCCACGAGAAAATGTTCTCCCGCCTTCGCTCATCTTGAATCCTCATCGCATCCGCAAAAGCGAAACCCCACAATTATAGAGAGAGAGATAGTGAGAGAGAGTGAGAGAGAGAGAGAGAGAGTCAAAAGCAGAAGTGAAGAGGAATGTAGTGAGGCTGCCTCTCTGGAAATGGACACACCAGAGAGGAACCAGATCGGCACTCCCATCTCCAAATTTGAGGATTCACCCGTCTTCAACTTTATCAATAGTCTTTCTCCTATAAAGCCTGTTAAGTCTGTTCATAGTATTCAGACTATCAATTCACTCAGTTTTTCATCTCCTCCATCTGTGTTTACATCTCCCCATGTCAGCTGTCACAGGGAATCTAGATTTCTCAGGAGGCATAACGTTTTAGATGCATCAAAGCATAAGGTTTTGTCTGAAGATGGGAAAAAAATATGTTCAAGTGAAGAAGCTCTTGCAGATTCAACTCATGCATATCATAACTCAAGTGTGCCACAAGGAAAGGCTGATCAAAGGATTCCCCTAGAAGATTCAACAATTGAGCCATCCAATCAGCAGCCGGAGTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCAGCTTGTGATCCTCCCACTGGTGGTGATGAGACAAATTCACTTATGGATTTGTCTGGTAAGGCAGCATCAGATGTTACCTATGTTGATGAAGCCTGTAAACAACATCCACCTGAGACTGAAATGCCACTTCCAGGAATGTGTCAAATTGAGCCAAGAATTGGAGGCCCAGAATGTGACTGGGACGGTTTACTTGCAGATGCTACAGATCTATTAATTTTCAACTCTCCAAATGAAAGAGAAACTTTAAAGGGTCTAATGCAGAAATCATTTGACCCCACTGGGCGGTTTAGCAATTTTGTGTCTCAGTTCCCACAAACTACCTTAAGTCATGGCGAGAAAATGGCAATTGTTGATCCAGCTGCTTCTGGTTCAGAACATGAAATCGAAGATCATCCTTCTCAACAAGGAGAAGTCATTGAGAATGATCAGGCACAGGACAATCTTGCTAACACTGCTGGGATGGGTTGCAATCCTAATAATACATTGAATAATCAGCTTGTTTCTATAACACGCCATGGCATACGGAGGCGTTGTCTAGACTTTGAGATGGTTGGAGGAAGAAGGAAGAACTCCAATGATGGTTCAAATAACAGTAGTTCCAGCGCATTACAATCTGATGAGGGGAATGTTGCTAATGATAAGCAGCTGCTTCCTGCAAAACGCAATGGTAATTCACAGAGGTGCACTTTGCCTGGAATTGGCTTACACTTGAATGCTCTTGGGGGCATAAAAGATTACAAAAGCTTGAACATCGAAAATATATCTTCTGGAAGACAACTTAGTCTGCCAAGCCTTGCCTTGCAACAATCTTCAAGCCAAGAACATAGTCTAGCATTGGTGCCTGTACCAGCAGAAGGAGATTCAGGTCTGCCAGACGATGGGTTTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATGTGGTTGATGAGGATTTCAACCACAATAGCCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGATGGTGAATCATGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCCGCTGGCGTCTACTGCATAGAACCTTGCTCTTGCCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTTGCTCCTAAAGTCATTCGAAGCTCGGATTCTGTACCTGAAATTGGGGATGATCCCAACAAAACTCCAGCTTCTGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCAAGCTGCTTGAAGAAATATTGTGAATGCTATCAGGGTGGCGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGATGCAAGAATGCTTATGGTAGAAAGGATGGTTCTGCTCCAATTGGAATAGAAGCTGAACCAGAAGAAGAAACAGAATCATCTGAGAAGGCTGTGGCTGAAAAATCTTTACAAAAATCCGAGATCCAGAACAACGAAGAACATCCAGACTCGACTCTTGCCACGACGCCATTACGTATTTGCAGACCGTTGCTTCCTCTATCATTTTCATCAAAGGGAAAACCACCAAGATCTTCTTTCATTACTACCATACCAGCTTCTGGATTGTATGCCAGCCAAAAACTGGGGAAACCCAGCATCCTTCGGTCTCAACCCAAGTTCGAAAAACCGTTTAAACCAGTTTCCAAAGACGAAATGCCGGAGGTTCTCCGGGGCGACGGATCTCCCAGCATCAAGACATCATCTCCAAATGGCAAGAGGATCTCATCTCCAAACTGTGAATTTGGATCATCTCCAAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTTCCTTCTCTCACTGCTCCTCACCTTTAG 2538 0.4397 MLRWHNRGNEGVIPTRKCSPAFAHLESSSHPQKRNPTIIEREIVRESERERERVKSRSEEECSEAASLEMDTPERNQIGTPISKFEDSPVFNFINSLSPIKPVKSVHSIQTINSLSFSSPPSVFTSPHVSCHRESRFLRRHNVLDASKHKVLSEDGKKICSSEEALADSTHAYHNSSVPQGKADQRIPLEDSTIEPSNQQPEFPIELPQTLKYDCGSPACDPPTGGDETNSLMDLSGKAASDVTYVDEACKQHPPETEMPLPGMCQIEPRIGGPECDWDGLLADATDLLIFNSPNERETLKGLMQKSFDPTGRFSNFVSQFPQTTLSHGEKMAIVDPAASGSEHEIEDHPSQQGEVIENDQAQDNLANTAGMGCNPNNTLNNQLVSITRHGIRRRCLDFEMVGGRRKNSNDGSNNSSSSALQSDEGNVANDKQLLPAKRNGNSQRCTLPGIGLHLNALGGIKDYKSLNIENISSGRQLSLPSLALQQSSSQEHSLALVPVPAEGDSGLPDDGFQPAEDCSQPSGYVVDEDFNHNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIGIEAEPEEETESSEKAVAEKSLQKSEIQNNEEHPDSTLATTPLRICRPLLPLSFSSKGKPPRSSFITTIPASGLYASQKLGKPSILRSQPKFEKPFKPVSKDEMPEVLRGDGSPSIKTSSPNGKRISSPNCEFGSSPSRRSGRKLILQSIPSFPSLTAPHL 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0636 845 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 639 674 IPR005172 -
Alju13g0636 845 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 553 588 IPR005172 -
Alju13g0636 845 MobiDBLite consensus disorder prediction 695 715 - -
Alju13g0636 845 ProSiteProfiles CRC domain profile. 551 676 IPR005172 -
Alju13g0636 845 MobiDBLite consensus disorder prediction 46 75 - -
Alju13g0636 845 SMART CXC_2 550 591 IPR033467 -
Alju13g0636 845 SMART CXC_2 636 677 IPR033467 -
Alju13g0636 845 MobiDBLite consensus disorder prediction 525 549 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 531 549 - -
Alju13g0636 845 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 70 841 IPR044522 GO:0003700
Alju13g0636 845 MobiDBLite consensus disorder prediction 778 792 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 797 839 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 46 64 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 770 845 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 407 427 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 403 427 - -
Alju13g0636 845 MobiDBLite consensus disorder prediction 682 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0636 Alju-ChrAlju13 23027567 23035287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0636 85 844 CPP Transcription Factor Family AT4G14770 43.878 2.41e-161 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju13g0636 TCR 3.4e-11 No_clan