Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0633 ATGGCCTCTCTTCTTCAACCTCATCATCGCCTTCATCCTCTGCCAATATTCTCTGTTGTCTTCTTTCTCATTTTTCTTCTCTCCATTATCAAACCTTCTCACCAAGCTTCTTCTACTTCTTCTAATGTCACCGTCCCGCTAAACCCTAGGCTCCTAAAAGCTTACTATGCTCTTCAAGCATGGAAACATTCCATCACCTCTGATCCCAACAACTTCACCTCCAACTGGTACGGCTACCATGTGTGCAACTACAACGGCGTTTACTGTGCACCGGCGCCTGATGATCCCCACGTGCACACCGTCGCCGGCATCGACCTCAACCACAGCAACATCTCCGGTACCTTGCCGGAAGACCTCGGTCTCCTCACCGACCTCGCCCTCTTCCACCTCAACTCTAACCACTTCTGTGGGACCCTCCCACAGAGCTTCCGTAACCTCCACCTCCTTCACGAGCTTGACGTCAGCAACAACCAATTATCCGGTCCCTTCCCCGACGTCGTTTTGTGTCTCCGTTCTTTGAAGTTCTTGGACATTAGATTTAACTCTTTCCATGGCAAAGTCCCTTCCGATCTCTTTGACCTTAAACTCGACGCCGTTTTCATAAACGACAATAAGTTTCAGTTCTCGTTGCCGGAGAATATCGGGAATTCGCCGGTGTCCGTCGTGGTTTTCGCTAATAATAATCTGAAGGGCTGTGTTCCGGCGAGTTTGGGGAAAATGAAGGCCACGCTTAATGAGATTATTATTTCAAACAGTGGATTAAAGGGTTGTTTGCCGGAGGAGATTGGAAAATTGGATCAGGTTACGGTGTTTGATGTGAGTAATAATAATTTGGTCGGGACGTTGCCGGGATCTATTGAGGGAATGAAGAAGTTGGAGCAGTTGAATGTGGCGCATAACGAGCTCTCCGGCGAGATTCCGGCCAGTGTCTGCTCGTTGCCGAGGTTGCAGAATTTTACGTACTCGTTTAATTACTTCTGTAGTGAACCGCCTACCTGCCTGAAGTTGCCGGCGAAAGATGACCGGAAAAATTGCATTCCGTACCGGCCGTTGCAGAGGTCGGAGGTGGAATGTAAAGCTTTTTATGCTCACCCCGTTGATTGTGGCGCCTTTGGATGTTCACGGCGGCCGCCGCCACCTCCTCCCCCACCTCCTCCTCCTCCGCCACCACCTCCTCCACCTCCTCCTCCTCCTCCGCCACCACCCCCTCCACCGGCGGTTCACCATTATTATTATCCGTAA 1242 0.5072 MASLLQPHHRLHPLPIFSVVFFLIFLLSIIKPSHQASSTSSNVTVPLNPRLLKAYYALQAWKHSITSDPNNFTSNWYGYHVCNYNGVYCAPAPDDPHVHTVAGIDLNHSNISGTLPEDLGLLTDLALFHLNSNHFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVVLCLRSLKFLDIRFNSFHGKVPSDLFDLKLDAVFINDNKFQFSLPENIGNSPVSVVVFANNNLKGCVPASLGKMKATLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSNNNLVGTLPGSIEGMKKLEQLNVAHNELSGEIPASVCSLPRLQNFTYSFNYFCSEPPTCLKLPAKDDRKNCIPYRPLQRSEVECKAFYAHPVDCGAFGCSRRPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAVHHYYYP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0633 413 FunFam Leucine-rich repeat extensin-like protein 1 55 216 - -
Alju13g0633 413 Pfam Leucine rich repeat N-terminal domain 56 89 IPR013210 -
Alju13g0633 413 MobiDBLite consensus disorder prediction 373 403 - -
Alju13g0633 413 Pfam Leucine rich repeat 243 302 IPR001611 GO:0005515
Alju13g0633 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 404 - -
Alju13g0633 413 MobiDBLite consensus disorder prediction 374 403 - -
Alju13g0633 413 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 329 - -
Alju13g0633 413 SUPERFAMILY L domain-like 55 337 - -
Alju13g0633 413 Gene3D Ribonuclease Inhibitor 219 346 IPR032675 -
Alju13g0633 413 Gene3D Ribonuclease Inhibitor 54 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0633 Alju-ChrAlju13 22998028 22999269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0633 48 373 Leucine-rich Repeat extension Gene Families AT3G22800 69.725 6.64e-164 467