Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0631 ATGGCGACTGCCCCAGCTTTGGCGGAAGGAGAAAAAATGTCTCTGAAAGATCAGGGCAATGAGTTTTTCAAGTCAGGGAAGTATCTCAAAGCCGCAGCACTTTACACGCAAGCTATCAAGCAAGATCCTTCAAACCCTACTCTTTATAGTAACCGTGCAGCTGCATTGCTACAACTGGATAAGCTTACAAAAGCTCTTGAGGATGCTGAGATGACAATAAAACTAAAACCTGAATGGGAAAAGGGGCATTTTAGGAAAGGATGCGTACTTGAGGCCCTGAAACGATATGATGATGCCTTAGCTGCCTTTCAGATGGCTTTGCAGTATAACCCACAAAGTCAAGAAGTATCAAAAAAGATAAGGAAGATAAACCAACTAGCAAAAGATAGAGATCGAGCACAAGAAGTGGAGAATAAAAGATCTAATGTTGACATGACTAAGCATTTAAATACATTGAAACCTGAATTGTCTGCAAGGTATGGATCCGAAGAATGCTGGAGAGACTTGTTTTCTTTCCTTGTTGAGACCATGGACACGGCTGTAAAATCATGGCATGCAACTTCTACAGTGGATCCTAGAGTCTACTTCCTTCTTGATAAGGAAAAGACAAATACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACACATGGAAGCTGCTTTTCATTTCTCAGGCAATATGCTGAAGACTCCTTTTCCAGCGCAGCTTGCTTAGTGGTTCCCAAAAGCATGATTGCTTATCCACAGGTCTGGAAAGGCCAAGGATCAAGGAGATGGAAACATGGTCAGAATGATGGTTTCTTTGTTCAATTTGAATCATCTTCACTGAGAAAACTCTGGTTTATTCCCAGTTCTAATGAAATGGGACAAACATTATGCAGGGACCCAGAAGTCCTGGACATTGGTGCTCATGAAATTCTTCCGCGCCTTCTCAAAGAAAAGCTGCCCAGTTCCTAG 978 0.4172 MATAPALAEGEKMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLTKALEDAEMTIKLKPEWEKGHFRKGCVLEALKRYDDALAAFQMALQYNPQSQEVSKKIRKINQLAKDRDRAQEVENKRSNVDMTKHLNTLKPELSARYGSEECWRDLFSFLVETMDTAVKSWHATSTVDPRVYFLLDKEKTNTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFSSAACLVVPKSMIAYPQVWKGQGSRRWKHGQNDGFFVQFESSSLRKLWFIPSSNEMGQTLCRDPEVLDIGAHEILPRLLKEKLPSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0631 325 PANTHER TPR REPEAT CONTAINING PROTEIN 8 320 - -
Alju13g0631 325 SMART tpr_5 80 113 IPR019734 GO:0005515
Alju13g0631 325 SMART tpr_5 12 45 IPR019734 GO:0005515
Alju13g0631 325 SMART tpr_5 46 79 IPR019734 GO:0005515
Alju13g0631 325 SUPERFAMILY TPR-like 14 123 IPR011990 GO:0005515
Alju13g0631 325 FunFam serine/threonine-protein phosphatase 5 11 125 - -
Alju13g0631 325 Pfam TPR repeat 19 59 - -
Alju13g0631 325 ProSiteProfiles TPR repeat profile. 12 45 IPR019734 GO:0005515
Alju13g0631 325 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Alju13g0631 325 Gene3D Tetratricopeptide repeat domain 11 126 IPR011990 GO:0005515
Alju13g0631 325 Pfam Tetratricopeptide repeat 81 112 IPR001440 GO:0005515
Alju13g0631 325 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0631 Alju-ChrAlju13 22973570 22978214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0631 1 123 U-box Gene Family AT3G07370 30.081 2.62e-08 52.4