Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0625 ATGGGCAAGACCAGCAAATGGCTCCGAAGCATCTTGACCGGCAAGAAAGACAAAGTCAAAGACTCAGACAAATATCCAAAGACCACTGACATTAATCCTCAACAAGATCGAACCCTGCCGCCGACCACCACCACAACAACCCCCAAAGAAAAACGACGATGGAGCTTCCGAAGATCCTCCGCCTCATCCACCACACCAACTACTGCCGCCGCCACAACACCGCCTCCTCCCGCAGAATCAAACCCCGTCGCTTCTAACTCACAGCCAACAGATATTGCCGCTGACGATGAGGAGCAGCAGATGAAACACGCCATGGCCGTCGCTGCCGCCGCGGCTGTCATGAGATTGACGGCTGAGGAGGCAGTGGCCATTAAAATTCAGTCTGTTTTCCGTTCATACTTGGCGAGGAAGGCATTGTGTGCGTTGAGAGGATTGGTGAAGTTGCAAGCACTGGTGAGGGGTCACTTGGTGAGGAAGCAAGCGACGGATACGTTGAGAAGAATGCAGGCTCTGGTGACGGCTCAGGCAAGAGCTCGAGCTCACAGGATTCAAATGGTTTTATCCGAAGATCACAACTTTAATAATAATACTCAGACAAGACATCTTCAAGAAAACATGTTCAAGCAGATCTATGATGAAATAGACATGAACCAAGAAGAGAACATCAAGATAGTGGAAATGGATGTATGTGAGACCGAAGGTGACTGTAGAAGGAGAAGAAACAACATCTACAACAATAACTACAACCCAAATTACCCTCACACATACTATTCACCAAAGGAAGAAGCCCAACGGGCCACCTCTCCAAGCCCATCAACCTTGACCGACATGAGCCCACGGGCCTATAGCAGCCACTTTGAAGACTGTACATCATTCGGCACGGCCCAAAGCAGCCCGCAACTCTATTATTCGGCAGTGTCGAGGCCCGAAGATCTTAAAAACCTCCCTTTCACCTTCCCAAAACCACCACTCTATGCAGAACCAGTTATGTCTTATGACTACCCTTTGTTCCCAAACTACATGGCCAACACAGAGTCATCTCGAGCCAAGGCGAGGTCACAGAGCGCGCCAAAGCAACGGCCGCCAGAGACGTTTGAGCGGCAGCCGAGCCGACGGCGGGCTTCGGTGGAAGGGAGGAACGTGCCTAGGCCCGTGAGAATGCAAAGGTCGTCATCTCATGTGGGCTCCACGGCCCATAACTACCAGTATCCTTGGTCCACGATCAGGCTTGATAAGTCCTCAGCTTCACTCAACAATAGTGAGTGTGGATCTTCCAGTACTGTTCTCACTAATACTAACTACTGCAAGTCCCTTGTTGCTTTTGATGTAAGTGCCTTCTAA 1341 0.5034 MGKTSKWLRSILTGKKDKVKDSDKYPKTTDINPQQDRTLPPTTTTTTPKEKRRWSFRRSSASSTTPTTAAATTPPPPAESNPVASNSQPTDIAADDEEQQMKHAMAVAAAAAVMRLTAEEAVAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQATDTLRRMQALVTAQARARAHRIQMVLSEDHNFNNNTQTRHLQENMFKQIYDEIDMNQEENIKIVEMDVCETEGDCRRRRNNIYNNNYNPNYPHTYYSPKEEAQRATSPSPSTLTDMSPRAYSSHFEDCTSFGTAQSSPQLYYSAVSRPEDLKNLPFTFPKPPLYAEPVMSYDYPLFPNYMANTESSRAKARSQSAPKQRPPETFERQPSRRRASVEGRNVPRPVRMQRSSSHVGSTAHNYQYPWSTIRLDKSSASLNNSECGSSSTVLTNTNYCKSLVAFDVSAF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0625 446 MobiDBLite consensus disorder prediction 10 27 - -
Alju13g0625 446 SMART iq_5 141 162 IPR000048 GO:0005515
Alju13g0625 446 SMART iq_5 118 140 IPR000048 GO:0005515
Alju13g0625 446 MobiDBLite consensus disorder prediction 248 280 - -
Alju13g0625 446 Pfam Protein of unknown function (DUF4005) 316 379 IPR025064 -
Alju13g0625 446 MobiDBLite consensus disorder prediction 261 280 - -
Alju13g0625 446 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Alju13g0625 446 MobiDBLite consensus disorder prediction 1 90 - -
Alju13g0625 446 Gene3D - 118 171 - -
Alju13g0625 446 MobiDBLite consensus disorder prediction 345 361 - -
Alju13g0625 446 MobiDBLite consensus disorder prediction 345 393 - -
Alju13g0625 446 MobiDBLite consensus disorder prediction 28 49 - -
Alju13g0625 446 Pfam IQ calmodulin-binding motif 123 139 IPR000048 GO:0005515
Alju13g0625 446 Pfam IQ calmodulin-binding motif 146 160 IPR000048 GO:0005515
Alju13g0625 446 MobiDBLite consensus disorder prediction 364 379 - -
Alju13g0625 446 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Alju13g0625 446 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0625 Alju-ChrAlju13 22933693 22935921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0625 1 444 IQD Protein Family AT4G14750 47.021 2.17e-114 342