Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0581 ATGCCGGTGACGCAAATGAAAGAGAGATTGGAGCAGCATCTTGTGATCAAAACCCACTTGCAGAACTCCATAAATCCGGCGAAGAAAGCACCCAAAACGGTCCAAAATGGCAAAGGTCCACCACCATCACCACCACCTCAAGAACCTCACAACGCCAAACCCCATAATAGCCAGAGCCAACCTCCACCTCCGGCTAAGAACAGAGGAAGAAGAAGGAGCCGGGGAGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGACCTGCTTGTCGACCCTGCACTGTGGCTAATAAACCGCTATCAGAAAACCCGGGTCATATTCTGGTATCAAGTCCTGTAAATGGGCCTGTTGTTGAAAATGGCGGCAACAGCAACTCTTGTGATGTCGTGATGGGGTTTCCGACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGCGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTAAACAGGGCCATCATGGCGGAACTCGTGAGACTGTACAAAGAGTCTGACTTGGGGATGAGGCTACCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGAGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTACTAAGAGAGCTATCAACTAAGAGGTTTTGCCCCATTGGGAGATCCTTCTTTTCACCCGATATTAGAACACCTCAAAGGCTTGGAGAGGGTTTGGAATCTTGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCAGCTGCGTTTATTGAGCCTCTTCCTGTGGTGGAATTTGTTGGTCAGCTGTTGGGAAAAGATGTGTTGTCAAGGCCATTGTCAGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGAAGGAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTACCTTGTCTTCAAGTAGGAAACCAAAAGAAGGCGAACTATTTGCCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAACGAGAAGCAAATTACTGCTTTGCTGAAAGTCACTTGTCAGAGACCCCGTGATCGGGAAAATGACATTTTGCGGACCATCCAACATAATGCTTTTGATCAAGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAATTAGCTTCTGTTGAAGCACGAATTCTTCCGGCCCCATGGTTGAAATATCATGACACTGGGAAAGAGAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAGCCGGTGGGCATGCATCAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGAAGTTTTTGTATTGAACTTGCTCAGATGTGTGAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAATGCCAAGCCTGAGCAGGTGGAGAAAGCTCTTAAGCATGTTTATCATGTTTCGATGAACAAAACCAAGGGAAAGGAGTTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGATCTTGGTTTAATTTCTCAATGCTGCCTGACAAAGCACGTCTTTAAGATCACTAAACAGTATCTGGCTAATGTGTCTCTGAAGATTAATGTTAAGATGGGAGGCAGAAACACTGTTCTTCTTGATGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCCGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACTAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAAGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACGGTTAGCGGTGGCATGATCCGAGACTTGTTGATCTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTAGATGCAATCCGGAAGGCTTGTGCTTCTTTGGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTGGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGAGACAAGGGCAGTACGGATAGAAGTGGGAATATCTTGCCAGGAACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTTTGCAGTCATGCTGGTATTCAGGGGACTAGTCGGCCAGCTCATTATCATGTCCTGTGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTGACAAACAATCTATGTTATACATATGCTAGGTGTACACGTTCTGTATCTGTTGTTCCTCCGGCATATTATGCTCATCTAGCAGCATTTCGTGCCCGGTTTTACATGGAGCCAGACATGCAAGAGAATGGCTCTACCGGCGGGGGTAGCATGGGTCATGGTTCCAAAGCATCGCGAGCAGCTGGAGAATGTGGGGTCCGGCCATTGCCAGCCTTGAAAGAAAACGTGAAGAAGGTAATGTTCTATTGTTAG 3018 0.441 MPVTQMKERLEQHLVIKTHLQNSINPAKKAPKTVQNGKGPPPSPPPQEPHNAKPHNSQSQPPPPAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENPGHILVSSPVNGPVVENGGNSNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAALPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAFDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCIELAQMCEVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKGSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSMGHGSKASRAAGECGVRPLPALKENVKKVMFYC 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0581 1005 FunFam protein argonaute 10-like 707 1005 - -
Alju13g0581 1005 Pfam Argonaute linker 1 domain 298 347 IPR014811 -
Alju13g0581 1005 FunFam Protein argonaute-2 343 469 - -
Alju13g0581 1005 MobiDBLite consensus disorder prediction 18 104 - -
Alju13g0581 1005 Gene3D - 707 1005 IPR036397 GO:0003676
Alju13g0581 1005 ProSiteProfiles PAZ domain profile. 350 464 IPR003100 GO:0005515
Alju13g0581 1005 SMART PAZ_2_a_3 354 486 IPR003100 GO:0005515
Alju13g0581 1005 Pfam N-terminal domain of argonaute 154 288 IPR032474 -
Alju13g0581 1005 Gene3D paz domain 343 468 - -
Alju13g0581 1005 SUPERFAMILY PAZ domain 344 503 IPR036085 GO:0005515
Alju13g0581 1005 SMART Piwi_a_2 638 959 IPR003165 GO:0003676
Alju13g0581 1005 FunFam Argonaute 10 528 701 - -
Alju13g0581 1005 Pfam Mid domain of argonaute 547 624 IPR032473 -
Alju13g0581 1005 SUPERFAMILY Ribonuclease H-like 628 960 IPR012337 -
Alju13g0581 1005 Gene3D - 528 701 - -
Alju13g0581 1005 Pfam PAZ domain 376 480 IPR003100 GO:0005515
Alju13g0581 1005 Pfam Piwi domain 639 958 IPR003165 GO:0003676
Alju13g0581 1005 Pfam Argonaute linker 2 domain 490 536 IPR032472 -
Alju13g0581 1005 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 130 960 - -
Alju13g0581 1005 MobiDBLite consensus disorder prediction 37 61 - -
Alju13g0581 1005 SMART DUF1785_2 297 349 IPR014811 -
Alju13g0581 1005 CDD PAZ_argonaute_like 349 463 - -
Alju13g0581 1005 CDD Piwi_ago-like 508 958 IPR045246 -
Alju13g0581 1005 ProSiteProfiles Piwi domain profile. 638 959 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0581 Alju-ChrAlju13 22222024 22230294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0581 1 1005 Eukaryotic Initiation Factors Gene Family AT5G43810 81.584 0.0 1663