Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0579 ATGCACATTGGAAAGGCGCAGCTGAGATGGTTACTAAGCTTGTGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAACTCTTGACAATGACAAGATGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTTAGGTGTATTGCCTTTGTACATACAGAAGTGGCTGAAGAAGATAGAGGAAACCAAAAGTTAAAAGAAGAAGGGCTCACCCTCTTAGGACTTGTTGGTATTAAGGATCCATGCCGTCCTGGTGTCAAGAAAGCTGTACAAGATTGCCAAAAAGCAGGAGTAAGTGTCAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCAACAGAATGTGGCATCCTCCAACCTAATGAAGACACAACAGAAGCAGTCATTGAAGGAGAGGTATTTCGGAACTTGTCTGATGATGAAAGACTAAAGAGCGCGGAGAAGATTTGTGTGATGGCACGATCATCTCCTTTTGACAAGCTCCTCATGGTGAACTTGATTATGGACACTTCGGGTGCTTTAGCTCTAGCAACAGAGAAGCCTAAAATGGAGTTACTGGATAAAACCCCAGTGGGTAGAACTGAGCCTCTCATCACCGACATCATGTGGAGAAATCTGTTAGCCCAAGCTCTATACCAGATATCAAATATATTTATATTACAGTTCAAGGGTGAGGCTATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCCAAGGGATTCACAGGAACAAGTTATTCATAGGGATCATAGGGATAACCATTGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACGGAGAGGTTGAATTGGGGGCAGTGGGGTGTATGCATTTTAATGGCAGCTGTTTCTTGGCCTCTTGGTTGGGTTGTCAAGTTCATTCCAGTGCCAGAGAGACCATTGTGCTCCAGGTGTTGA 1026 0.4279 MHIGKAQLRWLLSLCSKYYDASGNIKTLDNDKMLVFEQIIQGMAASSLRCIAFVHTEVAEEDRGNQKLKEEGLTLLGLVGIKDPCRPGVKKAVQDCQKAGVSVKMITGDNVFTAKAIATECGILQPNEDTTEAVIEGEVFRNLSDDERLKSAEKICVMARSSPFDKLLMVNLIMDTSGALALATEKPKMELLDKTPVGRTEPLITDIMWRNLLAQALYQISNIFILQFKGEAIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHRNKLFIGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAVSWPLGWVVKFIPVPERPLCSRC 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0579 341 Pfam haloacid dehalogenase-like hydrolase 70 128 - -
Alju13g0579 341 Pfam Cation transporting ATPase, C-terminus 167 330 IPR006068 -
Alju13g0579 341 SUPERFAMILY HAD-like 72 175 IPR036412 -
Alju13g0579 341 PANTHER CATION TRANSPORTING ATPASE 167 332 - -
Alju13g0579 341 Gene3D - 11 84 IPR023299 GO:0000166
Alju13g0579 341 Gene3D - 85 166 IPR023214 -
Alju13g0579 341 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 11 89 IPR023299 GO:0000166
Alju13g0579 341 Gene3D - 167 334 - -
Alju13g0579 341 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 332 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0579 Alju-ChrAlju13 22096276 22097625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0579 166 339 Primary Pumps ATPases AT3G63380 72.989 9.58e-83 269