Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0578 ATGTTTATGCCCTTCGTCACTAACGTCGAGCGATTACAAACACTTGTCAATGACCCTCACAATCTGAGCAAACCCAGCAAGAATTGGCATTCTTCTTTTGTTGCCATCTATTGTTCTAGAGCTCTCTTCTCTCACTTCACATCCACCAACAAGAACAACAGGTCTAAGTTGTCACCTTCTTCCTCCTTCACTGTCATCGATTTAAACACTTATCATTCCTTCGGTATTAGCCAAACCACCCTCACTAATGTCGTCAAGGAGAAAAATGTCGAGACCCTGCAAAATCTTGGTGGGGTCAATGGCCTGCTCTCTGCCCTTAAAACAAACAAAGATTATGGAGTCAAAGGTGGTGGTGATCACGATCCCGATGACGTCATACGACGGTGCGACGCCTTTGGTTCTAACATCTATCCAAAACCACCTACGAGAGGTTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTTTTAGTTTGTGCTGCTCTGTCCCTTGGCTTCGGCATCAAGGAGAAGGGAATCAAGGAAGGTTGGTATGAAGGTGGAAGCATCTTCGTCGCCGTTTTTCTTGTCATTGCTGTATCATCCATTAGTAATTTCAGACAGAGCAGACAGTTTGACAAGCTGTCCCAGGTCAGCAATAACATACAAGTCGATGTTTTACGAAGTGGTCGCCGGCAACAGGTTTCAATATACGACATCGTGGTTGGCGATGTTGTGTGGCTGAAGATCGGAGACCAGGTTCCTGCTGATGGCCTGTTCTTGGAAGGCCATTCCCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATGCCGACAAAAATCCATTTTTGTTTTCTGGTACTAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCGGTTGGTACGAACACCACATGGGGTCAGATGATGGGTACAATAAGCAGAGACAACAATGAAGAAACCCCCTTGCAAGAGCGCCTCAATAAGCTTACTTCTGCCATAGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTGGTTCGCTACTTCACAGGGAACACAACCGATGAGAATGGGAACAAAGAGTTCAACGGAAGCAGCACTAAGTTTAATGACATAATGAATGGAGTTGTGGATATTGTTGCTGCTGCTGTTACTATTGTTGTGGTTGCCATTCCAGAAGGGCTTCCTTTGGCCGTGACTTTGACGCTTGCTTACTCTATGAAGAAGATGATGTCTGATATGGCTATGGTGAGGAAGCTCTCTTCCTGCGAGACGATGGCGTCTGCAACAACCATCTGTACTGATAAGACTGGCAATCTCACGCTTAATCAGATGCGAGTGACCAAGTTCTGA 1386 0.4553 MFMPFVTNVERLQTLVNDPHNLSKPSKNWHSSFVAIYCSRALFSHFTSTNKNNRSKLSPSSSFTVIDLNTYHSFGISQTTLTNVVKEKNVETLQNLGGVNGLLSALKTNKDYGVKGGGDHDPDDVIRRCDAFGSNIYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVLRSGRRQQVSIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINADKNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGTISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGSSTKFNDIMNGVVDIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMSDMAMVRKLSSCETMASATTICTDKTGNLTLNQMRVTKF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0578 461 Pfam Cation transporter/ATPase, N-terminus 97 168 IPR004014 -
Alju13g0578 461 PANTHER CATION TRANSPORTING ATPASE 58 461 - -
Alju13g0578 461 FunFam Calcium-transporting ATPase 192 320 - -
Alju13g0578 461 Gene3D - 123 320 - -
Alju13g0578 461 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Alju13g0578 461 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Alju13g0578 461 Gene3D - 441 453 IPR023214 -
Alju13g0578 461 Gene3D - 151 440 - -
Alju13g0578 461 Pfam E1-E2 ATPase 220 422 - -
Alju13g0578 461 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 438 IPR023298 -
Alju13g0578 461 SMART Cation_ATPase_N_a_2 95 173 IPR004014 -
Alju13g0578 461 SUPERFAMILY Calcium ATPase, transduction domain A 219 318 IPR008250 -
Alju13g0578 461 NCBIfam HAD-IC family P-type ATPase 188 361 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0578 Alju-ChrAlju13 22094583 22095968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0578 12 461 Primary Pumps ATPases AT3G22910 64.978 8.24e-178 523