Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0576 ATGTCTATGCCCTTCGTCACTAACATGGAGCGCTTACAAACACTGCTCAATGCCCCTCACAATCTGAGCAAACGCAACCAGAAATGGCATTCTGCTTTTGTTACCATCTATTGTTCTAGAGCCTTCTTCTCTCATTTCCAATCCACCAACAAGAACAGCAGGTCTAAGTTGTCACCTTCTTCCTCCTTCACTGTCATCGATTTAAACACTTGTCATTCCTTCGGTGTTAGCCAAACCACCCTCACTAATGTCGTCAAGGAGAAAAATGTCGAGACCCTGCAAAATCTTGGTGGGGTCAATGGCCTGCTCTCTGCTCTTAAAACAAACAAAGATTATGGAGTCAAAGGTGGTGGTGATGACGATCCCGATGACGTCATACGACGGTGCGACGCCTTTGGTTCTAACACCTATCCAAAACCACCTACGAGAGGTTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTTTTAGTTTGTGCTGCTCTGTCCCTTGGCTTCGGCATCAAGGAGAAGGGAATCAAGGAAGGCTGGTATGAAGGTGGAAGCATCTTCGTCGCCGTTTTTCTTGTAATTGCTGTGTCATCCATTAGTAATTTCAGACAGAGCAGACAGTTTGACAAGCTGTCCCAGGTCAGCAATAACATACAAGTCGATGTTGTACGAAGTGGTCGCCGGCAACAGGCTTCAATATACGACATTGTGGTTGGCGATGTTGTGTGGCTGAAGATCGGAGACCAGGTTCCTGCTGATGGCCTGTTCTTGGAAGGCCATTCCCTGCAAGTTGATGAGTCAAGTATGACAGGTGAGAGCGACCACGTAGAGATTAATGCCGACAAAAATCCATTTTTGTTCTCTGGGACTAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCGGTTGGTACGAACACCACATGGGGTGAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCCTTGCAAGAACGCCTCAATAAGCTTACTTCTGCGATCGGCAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTGGTTCGCTACTTCACAGGGAACACAACTGATGAGAATGGGAACAAAGAGTTCAACGGAAGTAGCACTAAGTTTAATGACATAATGAATGGAGTTGTGGATATTGTTGCTGCTGCTGTTACTATTGTTGTGGTTGCCATTCCAGAAGGGCTTCCTTTGGCTGTGACTTTGACGCTTGCTTACTCTATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGCGAGACGATGGGGTCTGCAACAACCATCTGTACTGATAAGACTGGCACTCTCACGCTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGAGAAAAACCTATGGAAGAAAAACCTCATGAATCATCAGTTCGTTCAGATGTCCTTCAATTGATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTACAAGTCTAAATCAACAAATTTGGAATATGAGTTTTCAGGTAGTCCAACAGAAAAAGCCATTCTTTCTTGGGCTGTTCTTGATCTCAACATGAACATGGAGGAGCTGACGCAAAGTTCTACCATCCTTCATGTGGAAGCATTCAACTCAAAGAAGAAGAGAAGTGGGGTTTTGATCAAAAGGAATGCAGACAACAAAATTCATGCACATTGGAAAGGCGCAGCTGAGATGGTACTAAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAACTCTTGACAATGACAAGAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTTAGGTGTATTGCCTTTGCACATACAGAAGTGGCTGAAGAAGAAGATAGAGGAAACCAAAAGGTAAAAGAAGAAGGGCTCTCCCTCTTAGGACTTGTTGGTATTAAGGATCCATGCCGTCCTGGTGTCAAGAAAGCTGTACAAGATTGCCAAAAAGCAGGAGTAAGTGTCAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCTACAGAATGTGGCATCCTCCAACCTAATCAAGACACAACAGAAGCAGTCATTGAAGGAGAGGTATTTCGGAACTTGTCTGATGAGGAAAGACTAAAGAGGGCGGAGAAGATTTGTGTGATGGCACGATCATCTCCTTTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAAAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACGAATGATGCGCCAGCATTAAAAGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGCACTGAAGTTGCAAAGGAAAGCTCAGATATAGTCATCTTGGATGATAATTTCGCCTCAGTTGCCACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAATTTCAGCTTACAGTAAATGTTGCTGCACTTACAATTAACTTTGTGGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCTGTTCAACTATTGTGGGTGAACTTGATAATGGACACTTTGGGTGCTTTAGCTCTAGCAACAGAGAAGCCTACAATGGAGTTACTGAAGAAACCCCCAGTGGGTAGAATTGAGCCTATCATTACCAACATAATGTGGAGAAATCTATTAGCCCAAGCTCTATACCAGATCACAATTCTATTGACATTACAGTTCAAGGGTGAGGCTATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCCAAGGGATTCACAGGAACAAGTTATTCATAGGGATCATAGGGATAACCATTGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACGGAGAGGTTGAATTGGGGGCAGTGGGGTGTATGCATTGTAATGGCAGCTGTTTCTTGGCCTCTTGGTTGGGTTGTCAAGTTCATTCCAGTGCCAGAGAGGCCATTGCTCAGTTTCTTAAACATGAAGAAGCAATGGAAACTTTTTTGTAGATGGTTATGTTGGCACAGGGATGGGGTCTACTGA 3108 0.4366 MSMPFVTNMERLQTLLNAPHNLSKRNQKWHSAFVTIYCSRAFFSHFQSTNKNSRSKLSPSSSFTVIDLNTCHSFGVSQTTLTNVVKEKNVETLQNLGGVNGLLSALKTNKDYGVKGGGDDDPDDVIRRCDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQASIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINADKNPFLFSGTKVADGFAKMLVTSVGTNTTWGEMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGSSTKFNDIMNGVVDIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGEKPMEEKPHESSVRSDVLQLIKEGVALNTTGSVYKSKSTNLEYEFSGSPTEKAILSWAVLDLNMNMEELTQSSTILHVEAFNSKKKRSGVLIKRNADNKIHAHWKGAAEMVLRLCSKYYDASGNIKTLDNDKKLVFEQIIQGMAASSLRCIAFAHTEVAEEEDRGNQKVKEEGLSLLGLVGIKDPCRPGVKKAVQDCQKAGVSVKMITGDNVFTAKAIATECGILQPNQDTTEAVIEGEVFRNLSDEERLKRAEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLKKPPVGRIEPIITNIMWRNLLAQALYQITILLTLQFKGEAIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHRNKLFIGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCIVMAAVSWPLGWVVKFIPVPERPLLSFLNMKKQWKLFCRWLCWHRDGVY 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0576 1035 SFLD p-type atpase 426 801 IPR044492 -
Alju13g0576 1035 SUPERFAMILY Calcium ATPase, transduction domain A 219 318 IPR008250 -
Alju13g0576 1035 PANTHER CATION TRANSPORTING ATPASE 59 1005 - -
Alju13g0576 1035 SUPERFAMILY HAD-like 442 853 IPR036412 -
Alju13g0576 1035 SMART Cation_ATPase_N_a_2 95 173 IPR004014 -
Alju13g0576 1035 SFLD Haloacid Dehalogenase 426 801 - -
Alju13g0576 1035 Gene3D - 151 1003 - -
Alju13g0576 1035 Pfam Cation transporter/ATPase, N-terminus 97 168 IPR004014 -
Alju13g0576 1035 FunFam Calcium-transporting ATPase 192 320 - -
Alju13g0576 1035 NCBIfam HAD-IC family P-type ATPase 188 361 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 NCBIfam HAD-IC family P-type ATPase 385 480 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 NCBIfam HAD-IC family P-type ATPase 717 829 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 772 784 - -
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 664 674 - -
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 642 653 - -
Alju13g0576 1035 PRINTS P-type cation-transporting ATPase superfamily signature 748 767 - -
Alju13g0576 1035 PRINTS H+-transporting ATPase (proton pump) signature 600 618 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 PRINTS H+-transporting ATPase (proton pump) signature 748 764 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 PRINTS H+-transporting ATPase (proton pump) signature 780 805 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0576 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 1005 IPR023298 -
Alju13g0576 1035 FunFam Calcium-transporting ATPase 765 1007 - -
Alju13g0576 1035 FunFam Calcium-transporting ATPase 454 649 - -
Alju13g0576 1035 Pfam haloacid dehalogenase-like hydrolase 441 762 - -
Alju13g0576 1035 Pfam E1-E2 ATPase 221 422 - -
Alju13g0576 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 70 1005 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju13g0576 1035 Gene3D - 441 793 IPR023214 -
Alju13g0576 1035 Gene3D - 123 320 - -
Alju13g0576 1035 Pfam Cation transporting ATPase, C-terminus 833 1003 IPR006068 -
Alju13g0576 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Alju13g0576 1035 CDD P-type_ATPase_Ca_PMCA-like 127 881 - -
Alju13g0576 1035 Gene3D - 454 649 IPR023299 GO:0000166
Alju13g0576 1035 FunFam Calcium-transporting ATPase 644 793 - -
Alju13g0576 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 450 654 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0576 Alju-ChrAlju13 22074050 22077157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0576 12 1019 Primary Pumps ATPases AT3G22910 69.094 0.0 1337