Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0575 ATGGCGATGGCATTTGTGACCGATTTGGTGACAATACAGACACTTCTGAGTGCTCCAAAGAATCTGAGCAAACCCAACAAAAAATGGCATTCTGCATTTGTTAGTATTTATTGTTACAGAACTCTCTTGTCTCACTTCAAATCCTCTTTGCTTCCCTCCTCCACCACCGCCAATAACAACAAGCCTAAAAAGTTGTCACCTTCTTCTTCCTCCTACACTGTTATCGATTTAAACACAGATAATTCCTTTATAGTAAGCCAAACCACCCTCACAAATCTCGTGAAGGAGAAAAACGTGCAAACACTGCAAACTCTTGGTGGGGTCCATGGTGTGGCCTCTGCTCTAAAAACCGACATTCAAAATGGAGTCAAAGGCGGTGATGGTGATGATGATCTTTGTGACGTCATGCGACGACGCGACGCGTTTGGTTCTAATACCTATCCAAAACCACCTGCGAGAGGTTTTTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTTTTAGTTTGTGCTGCTCTGTCCCTTGGCTTCGGCATCAAGGAGAAGGGAATCAAGGAAGGCTGGTATGAAGGTGGAAGCATCTTCGTCGCCGTTTTTCTTGTCATTGCTGTATCATCCATTAGTAATTTCAGACAGAGCAGACAGTTTGACAAGCTGTCCCAGGTCAGCAATAACATACAAGTCGATGTTGTACGAAGTGGTCGCCGGCAACAGGCTTCAATATACGACATTGTGGTTGGCGATGTTGTGTGGCTGAAGATCGGAGACCAGGTTCCTGCTGATGGCCTGTTCTTGGAAGGCCATTCCCTGCAAGTTGATGAGTCAAGTATGACAGGTGAGAGCGACCACGTAGAGATTAATGCCGACAAAAATCCATTTTTGTTCTCTGGGACTAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCGGTTGGTACGAACACCACATGGGGTCAGATGATGGGTACAATAAGCAGAGACAACAATGAAGAAACCCCCTTGCAAGAACGCCTCAATAAGCTTACTTCTGCAATAGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTGGTTCGCTACTTCACAGGGAACACAACTGATGAGAATGGGAACAAAGAGTTCAATGGAAGCAGTACTAAGTTTAATGACATAATGAATGGAGTTGTGGATATTGTTGCTGCTGCTGTTACTATTGTTGTGGTTGCCATTCCAGAAGGGCTTCCCTTGGCTGTGACTTTGACGCTTGCTTACTCCATGAAGAAGATGATGTCTGATATGGCTATGGTGAGGAAGCTCTCTGCCTGCGAGACGATGGGATCTGCAACAACCATCTGTACTGATAAGACTGGCACTCTCACGCTTAATCAGATGAAAGTGACTAAGTTCTGGCTTGGAGAACAACCTATGGAAGAAAAACCTCATGAATCATCAGTTCGTTCAGATGTCCTTCAATTAATCAAAGAAGGGGTTGCCCTTAACACTACAGGTAGTGTTTACAAGTCTAAATCAACAAATTTGGAATATGAGTTTTCAGGTAGTCCAACAGAAAAGGCCATTCTTTCTTGGGGTGTTCTTGATTTGAACATGAACATGGAGGAGCTGACGCAAAGTTCCACCATCCTTCATGTGGAAGCCTTCAATTCAGAGAAGAAGAGGAGTGGGGTTTTGATTAGAAGAAAAGCAAACAACAAAATTCATGCACATTGGAAAGGCGCAGCTGAGATGGTACTAAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAACTCTTGACAATGACAAGAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCAGCCAGCAGCCTTAGGTGTATTGCCTTTGCACATACAGAAGTGGCTGAAGAAGAAGATAGAGGAAACCAAAAGGTAAAAGAAGAAGGGCTCGCCCTCTTAGGACTTGTTGGTATTAAGGATCCATGCCGTCAAGGTGCCAAGAAAGCTGTACAAGATTGCCAAAAAGCAGGAGTAAGTGTCAAAATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCTACAGAATGTGGCATCCTCCAACCTAATCAAGACACAACAGAAGCAGTCATCGAAGGAGAGGCATTTCGGAACTTGTCTGATGAGGAAAGACTGAAGAGAGCGGAGAAGATTTGTGTGATGGCACGATCCTCTCCCTTTGATAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACGAATGATGCGCCAGCATTAAAAGAAGCTGATATAGGACTTTCTATGGGGATTCAAGGTACTGAGGTTGCAAAGGAAAGCTCAGATATAGTCATCTTGGATGATAATTTCGCCTCAGTTGCCACAGTTCTAAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATTCAATTTCAGCTTACAGTAAATGTTGCTGCACTTACAATTAACTTTGTGGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCTGTTCAACTATTGTGGGTGAACTTGATTATGGACACTTTGGGTGCTTTAGCTCTAGCGACAGAGAAGCCTACAATGGAGTTACTGGATAAACCCCCAGTGGGTAGAATTGAGCCTCTCATCACCAACATAATGTGGAGAAATCTATTAGCCCAAGCTCTATACCAGATCACAATTCTATTGACATTACAGTTCAAGGGTGAGGCTATATTTGAGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCCAAGGGATTCACAGGAACAAGTTATTCATAGGGATCATAGGGATAACCATTGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACGGAGAGGTTGAATTGGGGGCAGTGGGGTGTATGCATTGTAATGGCAGCTGTTTCTTGGCCTCTTGGTTGGGTTGTCAAGTTCATTCCAGTGCCAGAGAGGCCATTGCTCAGTTTCTTAAACATGAAGAAGCAATGA 3090 0.4346 MAMAFVTDLVTIQTLLSAPKNLSKPNKKWHSAFVSIYCYRTLLSHFKSSLLPSSTTANNNKPKKLSPSSSSYTVIDLNTDNSFIVSQTTLTNLVKEKNVQTLQTLGGVHGVASALKTDIQNGVKGGDGDDDLCDVMRRRDAFGSNTYPKPPARGFFHFVIEGFKDPTILILLVCAALSLGFGIKEKGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQASIYDIVVGDVVWLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINADKNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGTISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGSSTKFNDIMNGVVDIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMSDMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGEQPMEEKPHESSVRSDVLQLIKEGVALNTTGSVYKSKSTNLEYEFSGSPTEKAILSWGVLDLNMNMEELTQSSTILHVEAFNSEKKRSGVLIRRKANNKIHAHWKGAAEMVLRLCSKYYDASGNIKTLDNDKKLVFEQIIQGMAASSLRCIAFAHTEVAEEEDRGNQKVKEEGLALLGLVGIKDPCRQGAKKAVQDCQKAGVSVKMITGDNVFTAKAIATECGILQPNQDTTEAVIEGEAFRNLSDEERLKRAEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRIEPLITNIMWRNLLAQALYQITILLTLQFKGEAIFEVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHRNKLFIGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCIVMAAVSWPLGWVVKFIPVPERPLLSFLNMKKQ 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0575 1029 SMART Cation_ATPase_N_a_2 107 183 IPR004014 -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 758 777 - -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Alju13g0575 1029 PRINTS P-type cation-transporting ATPase superfamily signature 782 794 - -
Alju13g0575 1029 Pfam E1-E2 ATPase 231 432 - -
Alju13g0575 1029 CDD P-type_ATPase_Ca_PMCA-like 137 891 - -
Alju13g0575 1029 Gene3D - 464 659 IPR023299 GO:0000166
Alju13g0575 1029 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Alju13g0575 1029 SFLD C1.7: P-type atpase like 436 811 - -
Alju13g0575 1029 FunFam Calcium-transporting ATPase 654 803 - -
Alju13g0575 1029 SFLD p-type atpase 436 811 IPR044492 -
Alju13g0575 1029 PANTHER CATION TRANSPORTING ATPASE 72 1015 - -
Alju13g0575 1029 FunFam Calcium-transporting ATPase 464 659 - -
Alju13g0575 1029 PRINTS H+-transporting ATPase (proton pump) signature 758 774 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 PRINTS H+-transporting ATPase (proton pump) signature 790 815 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 NCBIfam HAD-IC family P-type ATPase 727 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 NCBIfam HAD-IC family P-type ATPase 395 490 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 NCBIfam HAD-IC family P-type ATPase 198 371 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju13g0575 1029 Pfam Cation transporting ATPase, C-terminus 843 1013 IPR006068 -
Alju13g0575 1029 SUPERFAMILY Calcium ATPase, transduction domain A 229 328 IPR008250 -
Alju13g0575 1029 Pfam haloacid dehalogenase-like hydrolase 451 772 - -
Alju13g0575 1029 Pfam Cation transporter/ATPase, N-terminus 106 178 IPR004014 -
Alju13g0575 1029 Gene3D - 135 330 - -
Alju13g0575 1029 NCBIfam calcium-translocating P-type ATPase, PMCA-type 73 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju13g0575 1029 FunFam Calcium-transporting ATPase 775 1017 - -
Alju13g0575 1029 FunFam Calcium-transporting ATPase 202 330 - -
Alju13g0575 1029 SUPERFAMILY Calcium ATPase, transmembrane domain M 106 1015 IPR023298 -
Alju13g0575 1029 SUPERFAMILY HAD-like 452 863 IPR036412 -
Alju13g0575 1029 Gene3D - 451 803 IPR023214 -
Alju13g0575 1029 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 663 IPR023299 GO:0000166
Alju13g0575 1029 Gene3D - 161 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0575 Alju-ChrAlju13 22055939 22059028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0575 8 1029 Primary Pumps ATPases AT3G22910 68.774 0.0 1346