Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0539 ATGGAACCAGGCGCTCCTCCGCCGTCGCCGCCATCACCTCCGTCCACACCCTCTCCATCCTCCCCCGCCTTCACCATCCTCGGGAAGTATCAATTGATCCGTCTTTTAGGTCGTGGCAGCTTTGCAAAGGTCTATCAGGCTCGATCCCTAATCGACGGCTCCATCGTCGCCGTGAAGATCATCGACAAGTCCAAAACGGACGCCGCCATGGAGCCGAGGATTGTTCGTGAGGTTGATGCAATGCGACGGCTTCACGACCATCCTCATATTCTTAAGATCCATGAGGTTTTGGCCACGAAGACGAAGATTTACCTCATAGTGGAGTTCGCTGTCGGCGGGGAGTTGTTCTCGAAGATCTCGCGTAAAGGAAGGATGACGGAGGTGGTGGCGAGGCGGTATTTCCAGCAATTGGTTTCCGCCCTCTGTTTTTGCCACAAAAACGGCGTCGCTCACCGTGATGTGAAGCCTCAGAATCTTCTTTTGGACCACGAAGGGAATCTGAAGGTCTCCGATTTTGGACTCTCCGCCTTGCCGGAACAGCTTAAAAACGGGTTGCTCCACACGGCTTGTGGCACGCCGGCTTATACCTCGCCGGAGATACTCTTCCGGCGCGGATACGACGGCTCAAAAGCCGACGCATGGTCGTGCGGGCTTATACTCTACGTACTGCTCGCCGGCTACCTCCCGTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACAAGTTCCCGGACTGGATTTCCAAGCCGGCGCGGTTCGTGATTCACCGACTACTTGACCCGAACCCGAAGAACCGGATGAGCCTCGAATCTCTCTATCAAAACTCGTGGTTCAAGAAATCGCTCAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCCACGGCGAAATCGTATCAAAAGCTCGAAAGAATGGGGTCCGGCGTGAACGCCTTCGATATAATCTCGATGTCGTCAGGGCTGGACCTGACAGGGCTGTTCGAAACGACGTCGGATAACAGGAGAGAGAAGAGATTCACGACGAATGCTTCACTGGGAGCAGTGGAAGAGAAAGTGAAGGAAGTGGGAGGAATTTTAGGGTTCAAAGTTGAAATCGGTAAAAATGGAGCAATTGGATTAGGGAAAGGGAAGGTGGTTCTTGTGGTGGAGGTGTTCGAGATAGTTCCTGAGTTGTTAATGGTGACTGTGAAAGTGACTAATGGTGGGTTTGAGTTTGATGAGCTTCACTGGGGAGACTGGAAATCTGGCCTGCAAGATGTTGTTCTTTCATGGCACAATGAATCACTGTGA 1311 0.5301 MEPGAPPPSPPSPPSTPSPSSPAFTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKSKTDAAMEPRIVREVDAMRRLHDHPHILKIHEVLATKTKIYLIVEFAVGGELFSKISRKGRMTEVVARRYFQQLVSALCFCHKNGVAHRDVKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTSPEILFRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYKFPDWISKPARFVIHRLLDPNPKNRMSLESLYQNSWFKKSLKPQPDESLFESGPTAKSYQKLERMGSGVNAFDIISMSSGLDLTGLFETTSDNRREKRFTTNASLGAVEEKVKEVGGILGFKVEIGKNGAIGLGKGKVVLVVEVFEIVPELLMVTVKVTNGGFEFDELHWGDWKSGLQDVVLSWHNESL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0539 436 MobiDBLite consensus disorder prediction 1 20 - -
Alju13g0539 436 Gene3D Transferase(Phosphotransferase) domain 1 115 303 - -
Alju13g0539 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Alju13g0539 436 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0539 436 Gene3D Kinase associated domain 1, KA1 313 429 - -
Alju13g0539 436 FunFam Non-specific serine/threonine protein kinase 23 114 - -
Alju13g0539 436 FunFam Non-specific serine/threonine protein kinase 312 429 - -
Alju13g0539 436 SMART serkin_6 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0539 436 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Alju13g0539 436 Pfam NAF domain 316 371 IPR004041 GO:0007165
Alju13g0539 436 MobiDBLite consensus disorder prediction 1 21 - -
Alju13g0539 436 FunFam Non-specific serine/threonine protein kinase 21 312 - -
Alju13g0539 436 CDD STKc_AMPK-like 29 283 - -
Alju13g0539 436 Gene3D Phosphorylase Kinase; domain 1 33 114 - -
Alju13g0539 436 CDD CIPK_C 317 425 - -
Alju13g0539 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 404 - -
Alju13g0539 436 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0539 436 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Alju13g0539 436 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0539 Alju-ChrAlju13 20944825 20946135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0539 9 434 Miscellaneous Gene Families AT3G23000 57.241 7.94e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju13g0539 Pkinase 5.3e-68 CL0016