Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0535 ATGAGAAACTCCATACTCCACCATGTTTCTCTTCTCATCTTCTCCTCCTTCATCTTCCTCCTCCTTCATCTTCCTCATATTTCACAAGCTCAAAACGACATAGAACCCAACACCACCGGCTACCAGTGCCCCGCCAACCAGACCGCCGGCTCCGGCTACCCCTGCCGGACCTACGCCTTCTACCGAGCTTCAGCCCCTAATTTCCTTGACCTCGCTTCCATTGGTGACCTCTTCTCCGTTAGCCGACCCATGATTGCAGGTACAAGCAACATTTCTACTCCTAATTCAAATTTAGCCGCAAATCAACCCCTCTTCATTCCCATATCTTGCTCCTGCAACTTCATCAATTCAACCTTCGGTTCCATCTCTTACGCCAATCTCTCCTACACCATCAAGAAAGGAGACACGTTCTACTTAGTGTCCTCTTTTAGCTACATGAACCTCACGACCTACCAATCCGTCGAAGTCGTAAACCCTACCCTCATCGCGGAGAATTTGACGATCGGCGTTAGCGCCGTGTTCCCTGTGTTCTGCAAGTGCCCTAACACCACGCAATTGCGAAACGGCGAGAACACCCTGATTTCCTACGTGGTTCAACCGTCGGATACCGTATTGTCGATTGCCTCCTTTTTTGGATCGAAATCGCAGTCAATAGTTGATGCTAACCGTAAAAGTTTCCGAGAATTTGACACCATCTTTGTTCCGGTATCGCGATTGCCGGTGCTGACTCAGCTTCCGGTCAACACTTCGGCGCCGCCGCCTTCGCCTCCTGCTGCAACACCTGTAACTTCCGGCGGCGACAGAACAGGAACTGTGAGAGGATTGGCGATTGGGCTAGGGATTGTGGGGTTACTGTTGATTCTGATTTTGGTGATGTGGGTTTACAGGGAGGGTTTGTTCAAGGACAGATTGGCGATGGTGGTCGGAGATGAAGAGAGGCGAAAGCAGAGCTTTGTGAAGGAGACGAAGAAGGGATCGAAAGAAGAGGAGGTGAAATTGATGGCGAATGTGTCGGATTGTTTGGATAAGTATAGGGTTTTTGGGTATGAAGAACTGAGAGAAGCCACTAATGGGTTTGATCAGAGCTGCTTGATTCTTGGGTCTGTGTATAAAGGAACCATTGATGGAGAGGTCTATGCTATAAAGAAGATGAAGTGGAATGCTTATGAGGAGCTCAAGATCTTACAGAAGGTAAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGACGACGACGAAGCAAACTGCTATCTAGTCTATGAATATGTTGAAAATGGATCCCTCTACTCGTGGCTGCATGAAGACCGGATCGAACGGTTGAACTGGAAGATGAGGCTACACGTGGCCATCGATGTAGCCAATGGCTTGCAATACATCCACGAGCACACAAGGCCAAGGGTTGTGCACAAAGACATCAAGAGTAGCAACATCCTCTTAGACGCCAACATGAGAGCCAAGATAGCCAATTTCGGACTCGCAAAGTCTGGAATGAACGCCATCACAATGCACATTGTGGGAACTCAGGGTTACATAGCTCCTGAATATCTAGCTGACGGTGTGGTCTCCACCAAGATGGATGTGTTCTCCTTCGGCGTGGTTCTTCTTGAACTGATCACGGGCAAAGAAGCCGCCGATGACAGAGGTAATCCCCTGTGGACAAGCGTGGTAAGAGCTTTTGAAGTGGGTATTAGTGAGCAAGAGAAGGGCAAGAGACTAAGGGAGTGGTTGGATGGTTCTCTTATGAGAGAGACATTGTCAATTGAGAGTTTGATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAAGATCCAGCAAAGAGGCCAAGTATGGTGGATATTGTTTATGCTTTGAGTAAAAGTGAAGATTCCAGTTTTGATACCTCGGATGATACCATAGGTTCTCCATTGGTATCCGCAAGGTGA 1932 0.4803 MRNSILHHVSLLIFSSFIFLLLHLPHISQAQNDIEPNTTGYQCPANQTAGSGYPCRTYAFYRASAPNFLDLASIGDLFSVSRPMIAGTSNISTPNSNLAANQPLFIPISCSCNFINSTFGSISYANLSYTIKKGDTFYLVSSFSYMNLTTYQSVEVVNPTLIAENLTIGVSAVFPVFCKCPNTTQLRNGENTLISYVVQPSDTVLSIASFFGSKSQSIVDANRKSFREFDTIFVPVSRLPVLTQLPVNTSAPPPSPPAATPVTSGGDRTGTVRGLAIGLGIVGLLLILILVMWVYREGLFKDRLAMVVGDEERRKQSFVKETKKGSKEEEVKLMANVSDCLDKYRVFGYEELREATNGFDQSCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDEANCYLVYEYVENGSLYSWLHEDRIERLNWKMRLHVAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDANMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELITGKEAADDRGNPLWTSVVRAFEVGISEQEKGKRLREWLDGSLMRETLSIESLMGVLNIALACLHKDPAKRPSMVDIVYALSKSEDSSFDTSDDTIGSPLVSAR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0535 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Alju13g0535 643 MobiDBLite consensus disorder prediction 245 266 - -
Alju13g0535 643 Pfam Protein kinase domain 367 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0535 643 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Alju13g0535 643 SMART serkin_6 359 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju13g0535 643 FunFam PTI1-like tyrosine-protein kinase 3 425 634 - -
Alju13g0535 643 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 627 - -
Alju13g0535 643 SUPERFAMILY Protein kinase-like (PK-like) 343 620 IPR011009 -
Alju13g0535 643 Gene3D Phosphorylase Kinase; domain 1 319 424 - -
Alju13g0535 643 ProSiteProfiles Protein kinase domain profile. 341 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0535 Alju-ChrAlju13 20865389 20869041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0535 14 622 Receptor kinase-like Gene Family AT2G23770 33.544 3.10e-89 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju13g0535 Pkinase 2.6e-41 CL0016