Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0526 ATGGAGAACAAAGTGGCTTTTGAGAATGATCTGAATCTCAATGATACAGAGCTCAGATTAGGGTTGCCAGGAAGGGAAGAAAAAGAACAAAAATCCCTGGTTAGCTCCAAGAATAACAAGAGGGTTTTATCTGAAGCTTCTGAGGATTGTGGAACAAAGGGTTCAAAAGAATCAGCTCCTCCTCCAGCCAAGGCAAAGATTGTGGGGTGGCCACCAATCAGATCTTACAGGAAGAGCAGCTTGCAGGAGGCTGATGCTTCTGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCATACCTCAGGAAGATTGATTTGAAGGTTTACAATGGTTATCCAGAACTCCTCAAGGCTTTAGAAAACATGTTCAAGTTAACCATAGGTCAGTACAATGAAAGAGAGGGTTACAAAGGGTCAGAATTTGCACCTACATATGAGGACAAGGATGGTGACTGGATGCTCGTTGGAGATGTTCCATGGGACATGTTTATGACTTCCTGCAAAAGATTGAGAATCATGAAAGGATCTGGAGCTAGAGGATTGGGTTGTGGAGTATGA 558 0.4319 MENKVAFENDLNLNDTELRLGLPGREEKEQKSLVSSKNNKRVLSEASEDCGTKGSKESAPPPAKAKIVGWPPIRSYRKSSLQEADASGIYVKVSMDGAPYLRKIDLKVYNGYPELLKALENMFKLTIGQYNEREGYKGSEFAPTYEDKDGDWMLVGDVPWDMFMTSCKRLRIMKGSGARGLGCGV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0526 185 FunFam Auxin-responsive protein 83 185 - -
Alju13g0526 185 MobiDBLite consensus disorder prediction 16 65 - -
Alju13g0526 185 SUPERFAMILY CAD & PB1 domains 79 174 - -
Alju13g0526 185 Pfam AUX/IAA family 49 182 IPR033389 -
Alju13g0526 185 Gene3D - 82 185 - -
Alju13g0526 185 ProSiteProfiles PB1 domain profile. 88 175 IPR000270 GO:0005515
Alju13g0526 185 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 178 IPR003311 GO:0005634|GO:0006355
Alju13g0526 185 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0526 Alju-ChrAlju13 20562907 20563814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0526 73 179 B3 DNA Binding Superfamily AT1G34390 33.645 6.65e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju13g0526 AUX_IAA 3.8e-51 CL0072