Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0524 ATGGCAAGTTTGAATCTGAAGGAGACGGAGCTGTGTCTGGGATTACCCGGCGGCGGCGGCTGCGAGGTGGTGGAAACCGCCACTCCAAAGGCCTCATCAGGGAACAAGAGAGCCTTCTCTGCAACTGTTGATCTCAAGCTCAACCTCGTCGATGATTCCAAGGATCTAGATGATGCTGCCGGCGAAGAAGTAGATCTCATGAAAAATCATCAAGACCACAAGAATATCATCTCCTCCACTAAGAAGGACCCAGCTAAGCCACCGACTAAGGCACAAGTGGTGGGTTGGCCACCAGTGAGGTCATACAGGAAGAACGTGATGACACAGAAGGTGAGCAGTGAGGAGGAAGGGAATACTGAGAAGAAGACCGCAGCGGCGAACGGCGGCGGCGGAGGATATGTGAAGGTGTGTATGGATGGTGCACCCTATCTTCGGAAGGTGGACTTGAAAATGTACAAAAGCTACCAACAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGGAAGTATGAGGGGGACCATGAGCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTCGTTGGCGATGTCCCATGGCAGATGTTCGTTGATTCATGCAAGCGTCTCCGAATAATGAAAGGATCAGAAGCCATTGGATTGGCCCCAAGAGCCATGGAAAAATGCAAAAGCATCAGAACCTGA 762 0.5 MASLNLKETELCLGLPGGGGCEVVETATPKASSGNKRAFSATVDLKLNLVDDSKDLDDAAGEEVDLMKNHQDHKNIISSTKKDPAKPPTKAQVVGWPPVRSYRKNVMTQKVSSEEEGNTEKKTAAANGGGGGYVKVCMDGAPYLRKVDLKMYKSYQQLSDALAKMFSSFTMGKYEGDHEQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWQMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSIRT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0524 253 Pfam AUX/IAA family 8 243 IPR033389 -
Alju13g0524 253 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Alju13g0524 253 ProSiteProfiles PB1 domain profile. 131 234 IPR000270 GO:0005515
Alju13g0524 253 SUPERFAMILY CAD & PB1 domains 126 233 - -
Alju13g0524 253 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 239 IPR003311 GO:0005634|GO:0006355
Alju13g0524 253 FunFam Auxin-responsive protein 126 244 - -
Alju13g0524 253 Gene3D - 127 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0524 Alju-ChrAlju13 20482567 20484805 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0524 110 242 B3 DNA Binding Superfamily AT4G23980 28.986 3.93e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju13g0524 AUX_IAA 3.6e-85 CL0072