Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0493 ATGGGGTTTCGCATCTGTTCCATGTTGTGCCCACTGAGATCATCACTTACAATTCTGGCTAATCCTTGGTGGAGCACTCAGGTGGGGTTGCCGGGGGTTGACCTGGCGGCCAATTCACCGACGGTGCACAAACGGCACGGCACCACCACCACCACCGACCTCTCTATCAACGAAAGCAGCGGGAAAAATAGTGGCGGCGAAGACGATGAGCCCAAAGAAGGTGCAGTTGAGGTCGGAACTCGCAGACCTCGGGGCCGGCCATCCGGTTCGAAGAACAAGCCGAAGCCGCCGATCATCGTGACGCGGGACAGCCCCAATGCCCTCCGAAGCCACGTCATGGAGGTTGCCGGCGGAGCCGATGTAGCCGAAAGCGTAGCTCAGTTCGCTCGGCGCCGTCAACGTGGGGTTTGTGTCCTTAGTGGAAGCGGTTCCGTCGCTAACGTCACTCTCCGCCAACCTGCAGCTCCGGGAGCTCTTGTAGCACTCCATGGAAGGTTTGAGATTCTATCCCTAACCGGAGCCTTCTTGCCGGGGCCGGCGCCACCTGGATCCACGGGACTTACCGTTTACCTCGCCGGAGGTCAAGGGCAGGTCGTCGGTGGAAGCGTGGTGGGGTCACTAGTAGCAGCAGGACCAGTGATGGTCATTGCTGCAACTTTTGCTAATGCAACTTATGAGAGACTACCTCTTGATGATGAAGACGAAGGCATGCCCGCGGGGCAAGGCGGTGGCAGCGGTGGAGGTGGAGGAGGGTCTTCACCGCCGCCACAACCAGGGATCGGAAGCAGTGGGGGTCACTTGCAGCAGGGTGGGATTCCAGATCCTTCTTCACTTCCTTTGTATAATCTGCCACCAAATCTGCTTCCCAATGGTGGTGGTGGTGGTGGTGGAGGGCAGGTAGGTCATGAAGCTCTTGCTTGGGCAGCTCATGGTGGAAGACAACCTTATTAG 951 0.5836 MGFRICSMLCPLRSSLTILANPWWSTQVGLPGVDLAANSPTVHKRHGTTTTTDLSINESSGKNSGGEDDEPKEGAVEVGTRRPRGRPSGSKNKPKPPIIVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGALVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGMPAGQGGGSGGGGGGSSPPPQPGIGSSGGHLQQGGIPDPSSLPLYNLPPNLLPNGGGGGGGGQVGHEALAWAAHGGRQPY 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0493 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 52 308 IPR014476 GO:0003680
Alju13g0493 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 221 IPR005175 -
Alju13g0493 316 CDD DUF296 109 192 IPR005175 -
Alju13g0493 316 FunFam AT-hook motif nuclear-localized protein 108 235 - -
Alju13g0493 316 ProSiteProfiles PPC domain profile profile. 105 243 IPR005175 -
Alju13g0493 316 PIRSF ESCAROLA 29 315 IPR014476 GO:0003680
Alju13g0493 316 Gene3D - 108 237 - -
Alju13g0493 316 MobiDBLite consensus disorder prediction 230 316 - -
Alju13g0493 316 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 233 - -
Alju13g0493 316 MobiDBLite consensus disorder prediction 63 80 - -
Alju13g0493 316 MobiDBLite consensus disorder prediction 38 106 - -
Alju13g0493 316 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0493 Alju-ChrAlju13 19270672 19272115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0493 19 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.855 6.83e-98 288