Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0425 ATGATACCTTGTTGCATTGTCTTGGACTTGGTGCAAATGATTTTAATACATTCTAGTGGAGCAATGCAATTTCTTAAATTTTACTCCACTCTTTCATATTCTCTGAATAATTTATCCTCTATCACTACCAGATCCTTTCTTTCTCTGCCCTCTACCATCTCTTCAACTAAATCCTCAAAGGAATGCAGTATTGTTGTTGATTACCTAAGTTCAAACTTCAAATTCTCAAAAACTCAGTCCGTCTATATCTCAGAACGAGTTTTGCATGCTAGGTGCCCTCAAAAACCCTTCACCGTACTGAATTATTTTCAACAGATTGGATTCACTGAAGCCCATATCCAATCTATGGTTTGTCGAACACCCCAAATACTGTTTTCTGATATTGATAAAACCCTGAAGCCAAAAGTTGAGTACTTTCAGCAACTGGGCTTTGATGTTTCTGAGCTGGGAAAGTTTCTATCCACGAAGTCAACTCTTTTGACTTCGAGTTTGAACAAAACCTTGGCCCCCTCTGTGGAGACTATTAGGAAAATTGGTGGCAATGAGAAAGATCTTGTTAAACTGTTGCACAGAGTTGGCAGGATACTCCCAAGTCACAAAAAAATTTTGCGCAATGTTGCCTTCTTTCAGAGTTATGGGATCATTGGGTCTCAGCTTTTATATCTACTCAAAAGACAGCCTCTGCTTTTCACCAAACCGGAGTCTCTGCTTCAAAACCTTGTTTCACGGGCTGCAAACCTGGGTTTTCATGTAAATTCAAGAATGTTGGTGCATGCAATCCTTGTAGTCCATGGTTTGAGCACTGAAGCATTTGAAAGAAGATTGAAGTTAATTCAGAGTTATGGGTTTTCCAAAGATGAGAGCTTACAAATGTCGAGAAGAGCTCCATTTTTGCTTCGATCAGCTGAGAAGAAACTAAAGTTTGGATTTGAGTTCTTCTTGAATGAAGTTATGCTACCCAAGTCGGTGCTTGTTCAAAGACCTATGATCTTGTTGTATAGCATGGAAGATAGGGTGATTCCTCGGTACAGAATTTTGCAGCTGTTAATCTCTGAAAATTTACTCAAGAAGAATCCAAGTTTCGTTGAAATGTTAGAGATGCGTGAGGATACATTCTTGAAGAAGTATATTTTGAAGTTCAGACATAATGCGGAGACTTTATTAATGGCTTATAAAGTTCACCATCTTGAAGGTTTTTCTTGA 1203 0.384 MIPCCIVLDLVQMILIHSSGAMQFLKFYSTLSYSLNNLSSITTRSFLSLPSTISSTKSSKECSIVVDYLSSNFKFSKTQSVYISERVLHARCPQKPFTVLNYFQQIGFTEAHIQSMVCRTPQILFSDIDKTLKPKVEYFQQLGFDVSELGKFLSTKSTLLTSSLNKTLAPSVETIRKIGGNEKDLVKLLHRVGRILPSHKKILRNVAFFQSYGIIGSQLLYLLKRQPLLFTKPESLLQNLVSRAANLGFHVNSRMLVHAILVVHGLSTEAFERRLKLIQSYGFSKDESLQMSRRAPFLLRSAEKKLKFGFEFFLNEVMLPKSVLVQRPMILLYSMEDRVIPRYRILQLLISENLLKKNPSFVEMLEMREDTFLKKYILKFRHNAETLLMAYKVHHLEGFS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0425 400 Gene3D Transcription termination factor 3, mitochondrial 177 382 IPR038538 -
Alju13g0425 400 SMART mt_12 321 353 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 SMART mt_12 220 250 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 PANTHER CGI-12 PROTEIN-RELATED 58 378 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 FunFam Mitochondrial transcription termination factor-like 164 384 - -
Alju13g0425 400 Pfam mTERF 100 227 IPR003690 GO:0003690|GO:0006355
Alju13g0425 400 Pfam mTERF 159 373 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0425 Alju-ChrAlju13 16526528 16528456 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju13g0425 mTERF 1.3e-22 No_clan