Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0420 ATGGAAAGGACCATTTTGCCCTTATTGGGTCAGCTGCATCTCTTATCTTCATCCGGACCCACTCCCTTTTTCAGAATTCACAGTGGCAGAGTAGCTCTCTCGTTACGGAAGGAAACCATTGTCGTCAATGGAAGCTTCGAGAAACTTCCAATAGTCCTCCCACATTACCCACTTCCTCAGACAAGACTTCCTAAATCGATGGCTGTGGTTAAGATGGATAATTATTTTATCAAGGACAGGCCTGAAGATGTGTCCTGGCTATGCTCCCTTTCGAAGGCTGAGATTGATATGCTGGTAAATTTGAAGTTGTGTATCATTCACCGTGCTAAGATGATAGGTCATGAGGAACTAGCCGAGAAATTTGACATTAAAGTGCTTCGAGCCATTGCATTCGTTTCGATGGAATATCTCAAAGAAAAAGTGAGAGATTCATCACTTACTCGTGATGCTGCGAAGCCTGCTGCTATTTTAGATGCTTGCAACTTGTTGAGATGTGATCATGAGGGTGTCGCAAGTATTGAAGATCTAAGTGAAAATATTGGCGTTGATCCACGAAGTTTTTTAATTGAAGGGCCCCAGGACAAAGTCGGTTCAACACTAGCTGAAGTTAAACGAAAAAGGAAGGGCTTTTCTGTCAAAAAGAAAACGCTGAAGCTGAAAGCAAAGAACAAACGATTTAAAAATACTCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCTATTCTGGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGTAGAGGTGGTAGTGCCGTTGCTGTCTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAGAGAATTGAAGATGTTGGGGGCTTCATCATGTGGGCTGTTGGTGGTGTTCTTGCTATTTCTCGGGCATTTGGGGATAGACTCCTGAAGCAAAAATTAGCAGTGCACATCATCGATGCAAAGACAATGTCAGCTGACCCTGTTGCAGTTGTTGAATTGCCACATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACGGAGGTTAGTGTCAATCAACTTGTTTATCCTTCATATCACTCTAGTTCATTCTATCTCCCACTTGACCAGTTGACCTTATCTCCTTACTTCTTTGATTTCAATGAGAAAAGTTGGTGA 1161 0.4281 MERTILPLLGQLHLLSSSGPTPFFRIHSGRVALSLRKETIVVNGSFEKLPIVLPHYPLPQTRLPKSMAVVKMDNYFIKDRPEDVSWLCSLSKAEIDMLVNLKLCIIHRAKMIGHEELAEKFDIKVLRAIAFVSMEYLKEKVRDSSLTRDAAKPAAILDACNLLRCDHEGVASIEDLSENIGVDPRSFLIEGPQDKVGSTLAEVKRKRKGFSVKKKTLKLKAKNKRFKNTQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGSAVAVSRDHKPDQTDERQRIEDVGGFIMWAVGGVLAISRAFGDRLLKQKLAVHIIDAKTMSADPVAVVELPHRVPYGFHAFFVTEVSVNQLVYPSYHSSSFYLPLDQLTLSPYFFDFNEKSW 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0420 386 SMART PP2C_4 125 334 IPR001932 -
Alju13g0420 386 Pfam Retinal pigment epithelial membrane protein 311 347 IPR004294 GO:0016702
Alju13g0420 386 CDD PP2Cc 228 314 IPR001932 -
Alju13g0420 386 Pfam Protein phosphatase 2C 212 329 IPR001932 -
Alju13g0420 386 Gene3D - 184 350 IPR036457 -
Alju13g0420 386 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 75 186 - -
Alju13g0420 386 SUPERFAMILY PP2C-like 227 313 IPR036457 -
Alju13g0420 386 ProSiteProfiles PPM-type phosphatase domain profile. 143 386 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0420 Alju-ChrAlju13 15591037 15606902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0420 227 312 PP2C-type Phosphatase Gene Family AT4G31750 86.667 6.32e-48 163