Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0408 ATGGAAAGGACCATTTTGCCCTTATTAAGTCAGCTGCATCTCTTATCTTCATCCGGACCCACTCCCTTTTTCAGAATTCACAGTGGCAGAGTAGCTCTCTCGTCACGGAAGGAAACCATTGTCGTCAATGGAAGCTTCGAGAAACTTACAATAGTCCTCCCATATTACCCACTTCCTCAGACAAGACTTCCTAAATCGATGGCTGTGGTTAAGATGGATAATTATTTTATCAAGGACAGGCCTGAAGATGTGTCCTGGCTATGCTCCCTTTCGAAGGCTGAGATTGATATGCTGGTAAATTTGAAGTTGTGTATCATTCACCGTGCTAAGATGATAGGTCATGAGGAACTAGCCGAGAAATTTGACATTAAAGTGCTTCGAGCCATTGCATTCGTTTCGATGGAATATCTCAAAGAAAAAGTGAGAGATTCATCACTTACTCGTGATGCTGCGAAGCCTGCTGCTATTTTAGATGCTTGCAACTTGTTGAGATGTGATCATGAGGGTGTCGCAAGTGTTGAAGATCTAAGTGAAAATATTGGCGTTGATCCACGAAGTTTTTTAATTGAAGGGCCCCAGGACAAAGTCGGTTCAACACTAGCTGAAGTTAAACGAAAAAGCAAGGGCTTTTCTGTCAAAAAGAAAACGCTGAAGCTGAAAGCAAAGAACAAACGATTTATTCCGTCGTTCTTCTCTGACGCCGATCCCTTCCATCACCAGCTCACATCAGTTCCGGCGTCGAGCAACTCATTCAGAGATGCTGGATCAACTGCTTCCACTGCTATTCTGGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGTAGAGGTGGTAGTGCCATTGCTGTCTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAGAGAATTGAAGATGCTGGGGGCTTCATCATGTGGGCTGTTGATGGTGTTCTTGCTGTTTCTCGGGCATTTGGGGATAGACTCCTGAAGCAAAAATCAACAGTGCACGTCATCGATGCAAAGACAATGTCAGCTGACCCTGTTGCAGTTGTTGAATTGCCACATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGTTAGTGTCAATCAACTTGTTTATCCTTCATATCACTCTAGTTCATTCTATCTCCCACTTGACCAGTTGACCCTATCTCCTTACTTCTTTGATTTCAATGAGAAAAGTTGATTCATAGGATCTGGCAAATCTGCACAAGTGATTGAAGATAGCCTAAGTAATATGTTAGCTGTGATACCTCACTACAAATACCATTGTTGTGTGTGGAAGTAG 1320 0.4326 MERTILPLLSQLHLLSSSGPTPFFRIHSGRVALSSRKETIVVNGSFEKLTIVLPYYPLPQTRLPKSMAVVKMDNYFIKDRPEDVSWLCSLSKAEIDMLVNLKLCIIHRAKMIGHEELAEKFDIKVLRAIAFVSMEYLKEKVRDSSLTRDAAKPAAILDACNLLRCDHEGVASVEDLSENIGVDPRSFLIEGPQDKVGSTLAEVKRKSKGFSVKKKTLKLKAKNKRFIPSFFSDADPFHHQLTSVPASSNSFRDAGSTASTAILVGDRLLVANVGDSRAVICRGGSAIAVSRDHKPDQTDERQRIEDAGGFIMWAVDGVLAVSRAFGDRLLKQKSTVHVIDAKTMSADPVAVVELPHRVPYGFHAFFVTEVSVNQLVYPSYHSSSFYLPLDQLTLSPYFFDFNEKSXFIGSGKSAQVIEDSLSNMLAVIPHYKYHCCVWK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0408 439 CDD PP2Cc 237 336 IPR001932 -
Alju13g0408 439 ProSiteProfiles PPM-type phosphatase domain profile. 143 428 IPR001932 -
Alju13g0408 439 Gene3D - 201 370 IPR036457 -
Alju13g0408 439 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 75 186 - -
Alju13g0408 439 Pfam Retinal pigment epithelial membrane protein 316 367 IPR004294 GO:0016702
Alju13g0408 439 Pfam Protein phosphatase 2C 197 350 IPR001932 -
Alju13g0408 439 SMART PP2C_4 125 428 IPR001932 -
Alju13g0408 439 SUPERFAMILY PP2C-like 238 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0408 Alju-ChrAlju13 15033581 15053989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0408 228 332 PP2C-type Phosphatase Gene Family AT4G31750 74.783 1.53e-46 161