LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju13g0398	ATGGCGCCGAAACGTACTTCTCCCTTGGAGGAACTCCCCTCAGCTTCCTCTTCATCCGAGGAAGTAGAGGAAACTTCATCTGAAGACGACGATCAACCTCCGAAACTTACTCAACCAATCTCCACTGAGAAGAAGCCCGCTGGCAAAAAGCCTCCACCTGCTACTCCAGTCGCCAAGTCTCAACCACAAGCTTTAGTGTTGGTATCTGAGACAGAGTCTGATGCCGGATCTGACTCCGATGACGAGCGCCCCAGTGATAATACTGATCTGACAGTCGAGCCCATTGCCTCCAGGCCTAAAGAAGAAACGCCTAAAACAAAGAAGTCCAAGTCTCAGCCACCCGTTTCTCCGGACAAATCAGCGAACAAGCGACCGAGTGACAACAATCGGCCGGTCACTGACTCGAAAAAGGCGAAGAAGGGGAAGGATGCTTCTGGAGACGGTGAGATCCCGGCGACAGATGATGACGGTAAAAAAGCTGGGGATGAGTCCAAAAAGCTTTTTCAGAGACTCTGGAGTGAGGACGATGGGATTGCGATCCTCACGGGTTTAGCAGAATATGCAGGAAAAGCCTCGCTAAAGGATATTAATGGTTTTCACGATTTCATAAAGAAATCCGTCCATGTTGATGTTTCAAAGGAACAATTGGCGAATAAGATTCGGACTTTGAAGAGAAAGTACGTGAAGAATGCTGAAAGAGGGAAAAATGGTGAAGGTCCTAGTTTTTCTAAACCATACGATCAGAGAATATTTGAATTGTCAAGCAAAATCTGGGCTAATGAAGGAGCCAATGGAGGAATAGACATTAGAAAGTCGAATGGGAAAGTGAAGAAAAATGTGACGGAGGGTAAAATCGTTGCGGTTTCTGAGAAACCGGAGGCTGATCTGATTTCAGATTCGAAAGAAGCTAGAAAGGTTGACGTTGATCCGAATGCAGGTGCGCCGCTGAGTTTAAGTGAAATGATTAGGTTCAACAAAAGTCTGGGCCTGTCAGGGTTGGATGATGATGCTTTTAAGAGGGGATATGAATTGATTGGAGCTTCCAAGAAGGCAGAGCTGGAGGACAAGTGGAAGAAACTGCAAATTGCAGAATTGGAGTTGTTTGTGAAACGAGTTGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGCTGCCAATTCTTCAGGCAATTAG	1176	0.4634	MAPKRTSPLEELPSASSSSEEVEETSSEDDDQPPKLTQPISTEKKPAGKKPPPATPVAKSQPQALVLVSETESDAGSDSDDERPSDNTDLTVEPIASRPKEETPKTKKSKSQPPVSPDKSANKRPSDNNRPVTDSKKAKKGKDASGDGEIPATDDDGKKAGDESKKLFQRLWSEDDGIAILTGLAEYAGKASLKDINGFHDFIKKSVHVDVSKEQLANKIRTLKRKYVKNAERGKNGEGPSFSKPYDQRIFELSSKIWANEGANGGIDIRKSNGKVKKNVTEGKIVAVSEKPEADLISDSKEARKVDVDPNAGAPLSLSEMIRFNKSLGLSGLDDDAFKRGYELIGASKKAELEDKWKKLQIAELELFVKRVELVKDEASLIWEAANSSGN	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju13g0398	391	MobiDBLite	consensus disorder prediction	123	161	-	-
	Alju13g0398	391	Pfam	Protein of unknown function, DUF573	168	258	IPR007592	GO:0006355
	Alju13g0398	391	PANTHER	BNAANNG10740D PROTEIN-RELATED	12	380	IPR007592	GO:0006355
	Alju13g0398	391	MobiDBLite	consensus disorder prediction	1	161	-	-
	Alju13g0398	391	Coils	Coil	213	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju13g0398	Alju-ChrAlju13	14400073	14401248	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju13g0398	4	386	GeBP Transcription Factor Family	AT1G61730	30.370	3.94e-32	123

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Alju13g0398		DUF573	6.8e-29	CL0123