Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju13g0394 | ATGGGGCAAGCGCAATCGAAGAACGAGCTTCTTTACCAGCAAGTCAGTTACGGAAACATCGAAGGAATCAAAGCCCTTCATAGGGAGGGAGCAGGACTAGAGTGGGTGGACAGAGAAGGGAAGACGCCTTTGATTGTTGCTTGTATGAACCCTGAGCTGTATGATGTCGCAAAAACATTGATTGAACTTGGCGCCAATGTCAATGCATACCGTCCGGTTCTGACTTTTGAGATTGGCTATTGGGTAGGACGACATGCAGGCACTCCATTGCATCATGCGGCTAAAAGAGGCCTTGAAAGTATTGTTAAGCTGCTTCTTTTGCATGGAGCTAATGCATTGGTCTTGAACGATGATTGCCAAACTGCTCTTGATGTTGCCAGGGCCAAGGGCCACGGCAATGTTGTTCATGCTATTGAGAGTCATCTATGCTTGTTCTCTGGTTGGCTGCGGGAGTTCCATGGACCTGGATTCCTAGAAGTAGTAGCTCCACAGCTAGTATCTAAGAAAGTTTGGGTGGTTATTTTGCCAGTTGGCTCTCGTAATCTTACCAGACCCTACAAGCTGGAGCTTGCCATATATTCTAGTATGCAGGATGCACAGCCTCGAACAGTTATTGCTCTGTGGAAGGCCAACTTAGAAGAACCAAAGCTACACCAGTCAGATCCTTCAGTGACTATTGCTGATCCTGCAACAAAAACACGCGTTAAACTTGCACCTGCAAATGATAATGACAAGCAACAACTTAAGTGGTTCTCTGATGCATGCAAAGGAATTCCGCAGGAAAGTCCAGCATTTTTGCAGAGTAACATTAGAACAGCTCCTCCCTCAGCGCCACCAGCTGCAGAAGATCCAGAGATGGCTGCTGCTGCTGCTGCTGCTATCAGGGCATCCATGCAGTCTGCCATGCATGAAAGGCTACCCCTTGCAAATCCGCTTCCAAACTTTGGAGCAAGTTCTTCAAGTGGAGTAAATACAGACAAGCATGGTTCAATTGGCACAACAAATCCGAATACAAGTGGTAGTTTGCCCAAAAATGAAGGCGGACCGGGTAGCAACCCAAGTGAGCCCATTCATATCAATAATAATGAGCCTGTTTCTCAAAGTTCTGGTGGTTTGGATTTGATTCCTTCTGCTCCTCCAATTGCGGACGAGAATCCAATAGATTGCCCCATTCATTATCCGTCAATTGATTTAAGCCCTGTTGATATATCATCTCCAGCTGCAGAGAACCCGCCTGAAGAAGAAAAGAATGCTGCTGGCAGCAGCTCGTCTTGTGTGATCTGTTTAGATGCTCCGGCTGAGGGGGTATGCATACCCTGTGGCCACGTTGCTGGATGCATGTCTTGCTTGAATGAGGTCAAAGCGAAGAAATGGGGTTGCCCGGTTTGTCGAGCCAAGATCGATCAGGTGATAAAGATATATCACGTTTAA | 1431 | 0.4696 | MGQAQSKNELLYQQVSYGNIEGIKALHREGAGLEWVDREGKTPLIVACMNPELYDVAKTLIELGANVNAYRPVLTFEIGYWVGRHAGTPLHHAAKRGLESIVKLLLLHGANALVLNDDCQTALDVARAKGHGNVVHAIESHLCLFSGWLREFHGPGFLEVVAPQLVSKKVWVVILPVGSRNLTRPYKLELAIYSSMQDAQPRTVIALWKANLEEPKLHQSDPSVTIADPATKTRVKLAPANDNDKQQLKWFSDACKGIPQESPAFLQSNIRTAPPSAPPAAEDPEMAAAAAAAIRASMQSAMHERLPLANPLPNFGASSSSGVNTDKHGSIGTTNPNTSGSLPKNEGGPGSNPSEPIHINNNEPVSQSSGGLDLIPSAPPIADENPIDCPIHYPSIDLSPVDISSPAAENPPEEEKNAAGSSSSCVICLDAPAEGVCIPCGHVAGCMSCLNEVKAKKWGCPVCRAKIDQVIKIYHV | 476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju13g0394 | 476 | ProSiteProfiles | Ankyrin repeat region circular profile. | 39 | 69 | - | - | |
Alju13g0394 | 476 | Pfam | Zinc finger, C3HC4 type (RING finger) | 423 | 470 | - | - | |
Alju13g0394 | 476 | PANTHER | ROLLING PEBBLES, ISOFORM B | 415 | 473 | - | - | |
Alju13g0394 | 476 | ProSiteProfiles | Ankyrin repeat region circular profile. | 85 | 111 | - | - | |
Alju13g0394 | 476 | Pfam | Ankyrin repeat | 40 | 69 | IPR002110 | GO:0005515 | |
Alju13g0394 | 476 | SMART | ring_2 | 425 | 463 | IPR001841 | - | |
Alju13g0394 | 476 | MobiDBLite | consensus disorder prediction | 400 | 419 | - | - | |
Alju13g0394 | 476 | ProSiteProfiles | Zinc finger RING-type profile. | 425 | 464 | IPR001841 | - | |
Alju13g0394 | 476 | MobiDBLite | consensus disorder prediction | 269 | 288 | - | - | |
Alju13g0394 | 476 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 403 | 475 | IPR013083 | - | |
Alju13g0394 | 476 | ProSiteProfiles | Ankyrin repeat profile. | 39 | 72 | IPR002110 | GO:0005515 | |
Alju13g0394 | 476 | CDD | RING-HC_XBAT35-like | 421 | 474 | - | - | |
Alju13g0394 | 476 | MobiDBLite | consensus disorder prediction | 309 | 379 | - | - | |
Alju13g0394 | 476 | SUPERFAMILY | Ankyrin repeat | 7 | 143 | IPR036770 | - | |
Alju13g0394 | 476 | SUPERFAMILY | RING/U-box | 424 | 470 | - | - | |
Alju13g0394 | 476 | Gene3D | - | 3 | 159 | IPR036770 | - | |
Alju13g0394 | 476 | ProSiteProfiles | Ankyrin repeat profile. | 85 | 117 | IPR002110 | GO:0005515 | |
Alju13g0394 | 476 | MobiDBLite | consensus disorder prediction | 313 | 373 | - | - | |
Alju13g0394 | 476 | Pfam | Ankyrin repeats (many copies) | 88 | 126 | IPR002110 | GO:0005515 | |
Alju13g0394 | 476 | SMART | ANK_2a | 85 | 114 | IPR002110 | GO:0005515 | |
Alju13g0394 | 476 | SMART | ANK_2a | 39 | 69 | IPR002110 | GO:0005515 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju13g0394 | 417 | 473 | C3H Transcription Factor Family | AT3G06140 | 31.579 | 1.11e-07 | 52.0 |