Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0394 ATGGGGCAAGCGCAATCGAAGAACGAGCTTCTTTACCAGCAAGTCAGTTACGGAAACATCGAAGGAATCAAAGCCCTTCATAGGGAGGGAGCAGGACTAGAGTGGGTGGACAGAGAAGGGAAGACGCCTTTGATTGTTGCTTGTATGAACCCTGAGCTGTATGATGTCGCAAAAACATTGATTGAACTTGGCGCCAATGTCAATGCATACCGTCCGGTTCTGACTTTTGAGATTGGCTATTGGGTAGGACGACATGCAGGCACTCCATTGCATCATGCGGCTAAAAGAGGCCTTGAAAGTATTGTTAAGCTGCTTCTTTTGCATGGAGCTAATGCATTGGTCTTGAACGATGATTGCCAAACTGCTCTTGATGTTGCCAGGGCCAAGGGCCACGGCAATGTTGTTCATGCTATTGAGAGTCATCTATGCTTGTTCTCTGGTTGGCTGCGGGAGTTCCATGGACCTGGATTCCTAGAAGTAGTAGCTCCACAGCTAGTATCTAAGAAAGTTTGGGTGGTTATTTTGCCAGTTGGCTCTCGTAATCTTACCAGACCCTACAAGCTGGAGCTTGCCATATATTCTAGTATGCAGGATGCACAGCCTCGAACAGTTATTGCTCTGTGGAAGGCCAACTTAGAAGAACCAAAGCTACACCAGTCAGATCCTTCAGTGACTATTGCTGATCCTGCAACAAAAACACGCGTTAAACTTGCACCTGCAAATGATAATGACAAGCAACAACTTAAGTGGTTCTCTGATGCATGCAAAGGAATTCCGCAGGAAAGTCCAGCATTTTTGCAGAGTAACATTAGAACAGCTCCTCCCTCAGCGCCACCAGCTGCAGAAGATCCAGAGATGGCTGCTGCTGCTGCTGCTGCTATCAGGGCATCCATGCAGTCTGCCATGCATGAAAGGCTACCCCTTGCAAATCCGCTTCCAAACTTTGGAGCAAGTTCTTCAAGTGGAGTAAATACAGACAAGCATGGTTCAATTGGCACAACAAATCCGAATACAAGTGGTAGTTTGCCCAAAAATGAAGGCGGACCGGGTAGCAACCCAAGTGAGCCCATTCATATCAATAATAATGAGCCTGTTTCTCAAAGTTCTGGTGGTTTGGATTTGATTCCTTCTGCTCCTCCAATTGCGGACGAGAATCCAATAGATTGCCCCATTCATTATCCGTCAATTGATTTAAGCCCTGTTGATATATCATCTCCAGCTGCAGAGAACCCGCCTGAAGAAGAAAAGAATGCTGCTGGCAGCAGCTCGTCTTGTGTGATCTGTTTAGATGCTCCGGCTGAGGGGGTATGCATACCCTGTGGCCACGTTGCTGGATGCATGTCTTGCTTGAATGAGGTCAAAGCGAAGAAATGGGGTTGCCCGGTTTGTCGAGCCAAGATCGATCAGGTGATAAAGATATATCACGTTTAA 1431 0.4696 MGQAQSKNELLYQQVSYGNIEGIKALHREGAGLEWVDREGKTPLIVACMNPELYDVAKTLIELGANVNAYRPVLTFEIGYWVGRHAGTPLHHAAKRGLESIVKLLLLHGANALVLNDDCQTALDVARAKGHGNVVHAIESHLCLFSGWLREFHGPGFLEVVAPQLVSKKVWVVILPVGSRNLTRPYKLELAIYSSMQDAQPRTVIALWKANLEEPKLHQSDPSVTIADPATKTRVKLAPANDNDKQQLKWFSDACKGIPQESPAFLQSNIRTAPPSAPPAAEDPEMAAAAAAAIRASMQSAMHERLPLANPLPNFGASSSSGVNTDKHGSIGTTNPNTSGSLPKNEGGPGSNPSEPIHINNNEPVSQSSGGLDLIPSAPPIADENPIDCPIHYPSIDLSPVDISSPAAENPPEEEKNAAGSSSSCVICLDAPAEGVCIPCGHVAGCMSCLNEVKAKKWGCPVCRAKIDQVIKIYHV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0394 476 ProSiteProfiles Ankyrin repeat region circular profile. 39 69 - -
Alju13g0394 476 Pfam Zinc finger, C3HC4 type (RING finger) 423 470 - -
Alju13g0394 476 PANTHER ROLLING PEBBLES, ISOFORM B 415 473 - -
Alju13g0394 476 ProSiteProfiles Ankyrin repeat region circular profile. 85 111 - -
Alju13g0394 476 Pfam Ankyrin repeat 40 69 IPR002110 GO:0005515
Alju13g0394 476 SMART ring_2 425 463 IPR001841 -
Alju13g0394 476 MobiDBLite consensus disorder prediction 400 419 - -
Alju13g0394 476 ProSiteProfiles Zinc finger RING-type profile. 425 464 IPR001841 -
Alju13g0394 476 MobiDBLite consensus disorder prediction 269 288 - -
Alju13g0394 476 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 403 475 IPR013083 -
Alju13g0394 476 ProSiteProfiles Ankyrin repeat profile. 39 72 IPR002110 GO:0005515
Alju13g0394 476 CDD RING-HC_XBAT35-like 421 474 - -
Alju13g0394 476 MobiDBLite consensus disorder prediction 309 379 - -
Alju13g0394 476 SUPERFAMILY Ankyrin repeat 7 143 IPR036770 -
Alju13g0394 476 SUPERFAMILY RING/U-box 424 470 - -
Alju13g0394 476 Gene3D - 3 159 IPR036770 -
Alju13g0394 476 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Alju13g0394 476 MobiDBLite consensus disorder prediction 313 373 - -
Alju13g0394 476 Pfam Ankyrin repeats (many copies) 88 126 IPR002110 GO:0005515
Alju13g0394 476 SMART ANK_2a 85 114 IPR002110 GO:0005515
Alju13g0394 476 SMART ANK_2a 39 69 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0394 417 473 C3H Transcription Factor Family AT3G06140 31.579 1.11e-07 52.0