Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0390 ATGAGACTCAGAGATCTTCATCTCAAGCTCAAGGTATTAAGGCTAAAGCGATTAGTGTGGGGCTTTAATGGAGGCAAGAGGAGGAGGAAGATAAAGAAGAAGCCATCATGGATGAACCCAGCAGTGTCACATGGATGTCACGTGATCGATCGGCGAATACTCGGAGGATACTGTTCCGATGACTATGAAGAGTGTGATTCAGTTGTGGTACAGAGAGAACAGACGGAAAACAAAGAGCTTTGGTACTTCGGAATATTTGATGCTCTAATTGGAGATGGCGTCACCAAGTATATGCAATCACATTTGTTTCAGAAGCAGCTTGAAGAGTCTCATATGAGTAGAAAATGCAAGGAGACATTGAAGAGAGCATACTCAAGTTCCACAGCTAAGATATTGAGATCAGAGGATGATAAGAGGACGAGTCACCGAGTTGGCTCAGCATCAGCACTGGTCATCAATGGCGAAAAGCTTGTGACTGCCCAAATTGGAAATTGCAAGGCTGTTGTGTGCAGAGATGGGATTGCTTATCACACAAACCCCACTCCTCAACAACACTTAGACAAATTACCCCATTGGACTCACAAACTCTTTCCTGTGTTTATTTTATCACATATAGCATGTGAATGTGAATCATCAGGCGCAAGTGGAAGGCAGTCTAGAAGATCAGAACTTGTGGTCAAAGCTGAAAGGATTGATTCTGATACTGAATTTTTGATCTTAGCCCCCAATGGCATATGGAACGTAATGAAGAGTCAAGAGGCAGTGAATCTCATAAGGCACATAGAAAATCCCAACGAAGCTGCTAAATGCTTGGCTAAAGAAGCTTTGAATAGAATGAGCAAAAGCAACATCTCTTGCATTATTATTCGATTCGACTAA 879 0.4232 MRLRDLHLKLKVLRLKRLVWGFNGGKRRRKIKKKPSWMNPAVSHGCHVIDRRILGGYCSDDYEECDSVVVQREQTENKELWYFGIFDALIGDGVTKYMQSHLFQKQLEESHMSRKCKETLKRAYSSSTAKILRSEDDKRTSHRVGSASALVINGEKLVTAQIGNCKAVVCRDGIAYHTNPTPQQHLDKLPHWTHKLFPVFILSHIACECESSGASGRQSRRSELVVKAERIDSDTEFLILAPNGIWNVMKSQEAVNLIRHIENPNEAAKCLAKEALNRMSKSNISCIIIRFD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0390 292 SMART PP2C_4 47 289 IPR001932 -
Alju13g0390 292 CDD PP2Cc 65 291 IPR001932 -
Alju13g0390 292 ProSiteProfiles PPM-type phosphatase domain profile. 45 291 IPR001932 -
Alju13g0390 292 Pfam Protein phosphatase 2C 228 284 IPR001932 -
Alju13g0390 292 Pfam Protein phosphatase 2C 75 177 IPR001932 -
Alju13g0390 292 Gene3D - 57 194 IPR036457 -
Alju13g0390 292 PANTHER PROTEIN PHOSPHATASE 64 291 IPR015655 GO:0004722|GO:0006470
Alju13g0390 292 Gene3D - 205 292 IPR036457 -
Alju13g0390 292 SUPERFAMILY PP2C-like 66 292 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0390 Alju-ChrAlju13 13923148 13925446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0390 1 291 PP2C-type Phosphatase Gene Family AT3G23360 47.260 1.24e-77 235