Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0364 ATGATTTATTTGTGTGATGCTATTGTACCTGGTGATAAATATTCCATCTTAGACATTCCTTTTATCATGGATTTGTATATGTGGATAGATGGTAGGGTGCTCATGGAAATGGATTGCTTTGCTATATTGAATTGGGCATCTTTTGGTATTGGGGAGCGACGTCCTGATGCTGGGCCTGACCACTCAATTTTTGTAGAGGACCTAATACCTAATGTTACAGGTTATCTTCTGCAGGAGACATTCCGAGCCCATTATCCTTCAGTTAAAGGTGCTAAAGTTGTGATTGATCCTAATACAGGGTGTTCCAAGGGATATGGGTTTGTTAAATTTTCTGATGAAACTGGAAGGAATCGTGCTATGACTGAAATGAATGGTGTTTATTACTTGTAA 390 0.3872 MIYLCDAIVPGDKYSILDIPFIMDLYMWIDGRVLMEMDCFAILNWASFGIGERRPDAGPDHSIFVEDLIPNVTGYLLQETFRAHYPSVKGAKVVIDPNTGCSKGYGFVKFSDETGRNRAMTEMNGVYYL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0364 129 Gene3D - 60 129 IPR012677 -
Alju13g0364 129 FunFam Polyadenylate-binding protein RBP47B 49 129 - -
Alju13g0364 129 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 126 IPR000504 GO:0003723
Alju13g0364 129 SUPERFAMILY RNA-binding domain, RBD 43 127 IPR035979 GO:0003676
Alju13g0364 129 SMART rrm1_1 62 129 IPR000504 GO:0003723
Alju13g0364 129 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 61 129 IPR000504 GO:0003723
Alju13g0364 129 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 43 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0364 Alju-ChrAlju13 12192773 12193313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0364 62 126 Eukaryotic Initiation Factors Gene Family AT1G49760 36.923 4.60e-07 45.4