Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0362 ATGGCACAATGCTTCGACAGCTCTTCGTTGCGAACTTACATCCTTGCTGTTTTTGAATTCGAAGCTGTCTTCCCTTATGATTCCCTCCTATCTTCCCTTGAAACCCTTCTCTCCTTTCCGCGCTTCACCTCAATACTGGTTAGAGACAAGATTAATGGAGTCAAGAGATGGGAACGAGTTGAAGTGAAGTTAGAGGACCATATCATTGAACCAACATTTCCCTTGGATTCCATGAAATGAGCTGATGATCCCTCTCTTCCTCTCACTTTTCCTTCACTCAAATCATCAAATAACATCCGAAGCTTTCGTGTTGACAGACTTCCCTGCAGCTTCATCTCCACTATCTTCACTGGCATAAAATATTTTGGGTGGAGCTTACTCAAAAGTTCTTGGTTTGAAGATGACAAAACACCAGTGAGGTCTGGACATAAAAAAGTCGAGCTTCAACCAGCTGCGATATCTAGTATCATAGTTCCTATGGACCGTATCAGAGATATCAAGTCCAAACTTGGAGTGACAATAAATGATGTGATCACTGGAATAATTTTCTTTGGGATTCGGTTATATATGCAAGATGTTGACAATAGTTCAAGAACAAAGAATTGCACCCTGCTAACAGTCCTGAATACAAGAAATGTTCAAAGTTACGAGACAGCGAAGGATATGAGAAAGAGTAGTGAGGTTCATCATAAAGTGAAGAAGATGAAGGAACTTTCTTTGGTTTATGCCCTCCTTGGTGTGCTTATGAAGATGAAGCATCAATTCAAGGGCCCTCAGGTCTCTTGGAGTTGGAAACATCCTGGCCGCCGAACGATCCCTGCCCGACTCTCTTATCCCATCGCCTACACTCCACTGAATCCTAGTAGCACTACCCCTGGTTCATCAATGGCCGAAACCCCTAGCAAGTCTCTTCGATCTCCCACCAAATACAAACAACAATCCCATTTGGATTCTAGTTCCTCACCCTCAGTAAGCCCCGTAACCCCACAATCTGTAGCTCCTTGTAGATCGACCCGTCGTAAGTTGCTGGCCTTCGATTACGCCAATCCTCAAAGGCTTCTCAATCGCATAGATGAAGTTTGTGAACATCCGTCAAAAACTCCAAACAGGGATAAAGTTCGGCAAAGGAGAAATTTGGACAGGTCTCGTCGATCGATCGATTATGCTGAAGAACCTTGCGAAGGTAAAGTGATAACCCGCAGAAATAGAACTAGGGAAAGCGGTTCAATCAGCAAAGCACATAAAAAAGAGAGCAACTCTAGATGTGCAAAATGCCCAGCATCTATTCCAAGGGGCGAAACTTCAAAGAGGAGAAATGATAAAGATTCAGATTTAGTCGAAGTTTCTATCGCCCCAGTGTCGCCTGATCAATCTGAAACTAGGAAGAGGAAGAGGGTTGATGAAAGAAGGGTTGTTACAAGAGCTATGGTAGCAAGAAATGGGAAATCTGAGAAGGGGCAAAAGAGCAATACGTTGCCAAAGAGACGGGCGTATTATAAAAAAGTGGTATATGATGGGGGTGAGTTTGAAGTAGGCGATGATGTATATGTGAAGAGGAGAGAAGACACCGACTCAGATCACGAATATCCAGAAGTGGAGGAATGTAGGTTGTGTTTTAGTTCTGGGGAAGATGTTATGATTGAGTGTGATGATTGTTTAGGTGGCTTTCATTTGAAATGTTTGACTCCACCATTGAAGGAGGTTCCGGAAGGAGATTGGATTTGTGGGTTTTGTGAGGCTCGTAAGATAGGCAGGGACCTTAGTTTTCCCATGCCTCCGGCAGGCAAGAAGCTAGTTAGGACATTAAGGGAGAAGCTTCTTTCCAGCGATTTGTGGGCTGCTCACATTGAAAGTATATGGAAAGAAGGGGATGGCACCTATTATTGTCGTGTCAGGTGGTATGTGATCCCAGAAGAGACAGCTATTGGGAGACAGCCTCATAATCTGAAGAGGGAGCTATATAGAACAAATGATTTTGCTGAGATTGAGATGGAATCTATCATTAGACATTGCTTTGTCATGACTCCCAAAGAATTTTCCAAGGCCAACGAGGGAGATGATATTTTCTTTTGTGAATATGAATATGATGTTCACTGGCATGCTTTCAAGCGTCTTGCTGAGATTGACAATGACAATGAGGTTGGTGAAGAACCTGATAGTGATGAAGATTGGAATCTTTGCAAGGAATCAGACTCTGATACTGATGATAATGTTGAGTATGATGCAGACAATTTAAAAGGTCCACAACCTCAGTCGTCATCAAATTATGCGCCAGCTGCAAATCTGCGCAAGGGGCAATTTTTTGGCCTTCAAAAGATAGGAACCAAAAAAATTCCACACTTTATAAGGAATCACAAACAAACTGATATTGAGAGAGCAAAGGCCATGCTGTTGCTGGCATCATTACCTAAATATTTACCTTGTAGGAATAAAGAAATGGAGGAGATAGCCTCGTTTGTAAAAGGTGCCGTCTGTGATGATCAATGTCTAGGACGTTGTTTGTATATCCACGGTGTTCCTGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGGAGTTTGAGGTCAGAAGTTGATGCAGGAACCATACGACCGTACTGTTTTGTGGAGATTAATGGTTTGAAATTGGCGTCTCCAGAGAATATTTTCAGGGTCATATATGAGGCATTGAATGGTCACAGGGTCAGCTGGAAAAAGGCCCTTCACTTGTTAAATGAGAGATTTGTGGAAGGGAAAAAAACCGGAGAAAAGGCTGACCAGCCATGCATCCTTCTAATCGATGAACTTGATCTTCTTGTAACCAGAAATCAGTCGGTGCTCTATAATATTCTTGATTGGCCTACTAAGCCACATTCCAAACTAATAGTGATAGGGATAGCAAATACCATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGTCGAATGGGCATCCAGAGGCTTTGCTTTGGCCCATACAACTATCAGCAGCTTCAAGAAATCATTTCAAGTCGCTTGAAGGGAATAGATGTGTTTGAGAAGCAAGCTATAGAATTTGCTTCAAGAAAGGTTGCAGCAATCTCAGGGGATGCACGTCGTGCTTTGGAAATATGCAGACGTGCTGCAGAAATTGCTGATTATCGTACTAAGAAGCTGCATTCAAATTCTGACTTAGCTGCAGCAGGAAAGGGACTTGTTGCCATGGTAGATGTTGAAGCTGCCATCCAAGAAATGTTTCAGGCTCCTCATATTCAGGTGATGAAAAGCTGTTCTAGACTAGGCAAAATATTTTTGACAGCCATGGTACACGAGCTATATAAAACAGGCATGGGCGAAACCACTTTTGAGAAGTTGGCAATGGCGGTATCATGTCTGTGCGCCAGCAACGGAGAGGTTTTTCCTGGATATGACACGCTCCTTCATGTTGGATGTAGGCTGGGCGAATCCAGGATTCTTTTATGTGAAGCAGGTTCCAAGCACAGGTTGCAAAAGTTGCAGCTCAACTTCCCTAGTGATGATGTGGCATTTACGCTGAGAAACTGCGAGGATTTACCCTGGCTTGCCAAGTACCTACTTTAG 3564 0.4304 MAQCFDSSSLRTYILAVFEFEAVFPYDSLLSSLETLLSFPRFTSILVRDKINGVKRWERVEVKLEDHIIEPTFPLDSMKXADDPSLPLTFPSLKSSNNIRSFRVDRLPCSFISTIFTGIKYFGWSLLKSSWFEDDKTPVRSGHKKVELQPAAISSIIVPMDRIRDIKSKLGVTINDVITGIIFFGIRLYMQDVDNSSRTKNCTLLTVLNTRNVQSYETAKDMRKSSEVHHKVKKMKELSLVYALLGVLMKMKHQFKGPQVSWSWKHPGRRTIPARLSYPIAYTPLNPSSTTPGSSMAETPSKSLRSPTKYKQQSHLDSSSSPSVSPVTPQSVAPCRSTRRKLLAFDYANPQRLLNRIDEVCEHPSKTPNRDKVRQRRNLDRSRRSIDYAEEPCEGKVITRRNRTRESGSISKAHKKESNSRCAKCPASIPRGETSKRRNDKDSDLVEVSIAPVSPDQSETRKRKRVDERRVVTRAMVARNGKSEKGQKSNTLPKRRAYYKKVVYDGGEFEVGDDVYVKRREDTDSDHEYPEVEECRLCFSSGEDVMIECDDCLGGFHLKCLTPPLKEVPEGDWICGFCEARKIGRDLSFPMPPAGKKLVRTLREKLLSSDLWAAHIESIWKEGDGTYYCRVRWYVIPEETAIGRQPHNLKRELYRTNDFAEIEMESIIRHCFVMTPKEFSKANEGDDIFFCEYEYDVHWHAFKRLAEIDNDNEVGEEPDSDEDWNLCKESDSDTDDNVEYDADNLKGPQPQSSSNYAPAANLRKGQFFGLQKIGTKKIPHFIRNHKQTDIERAKAMLLLASLPKYLPCRNKEMEEIASFVKGAVCDDQCLGRCLYIHGVPGTGKTMSVLSVMRSLRSEVDAGTIRPYCFVEINGLKLASPENIFRVIYEALNGHRVSWKKALHLLNERFVEGKKTGEKADQPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYRTKKLHSNSDLAAAGKGLVAMVDVEAAIQEMFQAPHIQVMKSCSRLGKIFLTAMVHELYKTGMGETTFEKLAMAVSCLCASNGEVFPGYDTLLHVGCRLGESRILLCEAGSKHRLQKLQLNFPSDDVAFTLRNCEDLPWLAKYLL 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0362 1187 MobiDBLite consensus disorder prediction 398 421 - -
Alju13g0362 1187 SMART PHD_3 534 579 IPR001965 -
Alju13g0362 1187 Gene3D - 478 730 IPR043151 -
Alju13g0362 1187 FunFam Origin recognition complex subunit 1 598 789 - -
Alju13g0362 1187 Pfam BAH domain 615 703 IPR001025 GO:0003682
Alju13g0362 1187 ProSitePatterns Zinc finger PHD-type signature. 535 578 IPR019786 -
Alju13g0362 1187 SUPERFAMILY FYVE/PHD zinc finger 521 582 IPR011011 -
Alju13g0362 1187 FunFam Origin recognition complex subunit 1 530 597 - -
Alju13g0362 1187 Pfam ATPase family associated with various cellular activities (AAA) 835 980 IPR003959 GO:0005524|GO:0016887
Alju13g0362 1187 Gene3D - 982 1075 - -
Alju13g0362 1187 FunFam Origin recognition complex subunit 1 983 1075 - -
Alju13g0362 1187 MobiDBLite consensus disorder prediction 431 445 - -
Alju13g0362 1187 SMART BAH_4 581 706 IPR001025 GO:0003682
Alju13g0362 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 799 1054 IPR027417 -
Alju13g0362 1187 MobiDBLite consensus disorder prediction 398 469 - -
Alju13g0362 1187 MobiDBLite consensus disorder prediction 359 384 - -
Alju13g0362 1187 MobiDBLite consensus disorder prediction 283 333 - -
Alju13g0362 1187 Pfam AAA lid domain 1008 1041 IPR041083 -
Alju13g0362 1187 MobiDBLite consensus disorder prediction 711 757 - -
Alju13g0362 1187 Gene3D - 786 981 IPR027417 -
Alju13g0362 1187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 522 590 IPR013083 -
Alju13g0362 1187 Pfam PHD-finger 535 580 IPR019787 -
Alju13g0362 1187 ProSiteProfiles Zinc finger PHD-type profile. 532 581 IPR019787 -
Alju13g0362 1187 ProSiteProfiles BAH domain profile. 590 706 IPR001025 GO:0003682
Alju13g0362 1187 FunFam Origin recognition complex subunit 1 787 986 - -
Alju13g0362 1187 SMART AAA_5 830 984 IPR003593 GO:0016887
Alju13g0362 1187 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 639 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0362 Alju-ChrAlju13 12171274 12185255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0362 294 1186 Core DNA Replication Machinery Family AT4G14700 57.650 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Alju13g0362 AAA 1.1e-19 CL0023