Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0300 ATGGAATACCATGTAAACAAAGGAGAAGTGCTTGTGGAAACCTTGGAGAATACTTCAAACTGGCATATACCCATTTTGGCTATGACTGCAGATGTGATTCAGGCAACGCATAAGGAATGCTTGAAGTGTGGAATGGATGGATATGTTTCAAAACCATTTGAAGCCGAACAGCTTTATCAGGAAGTTTCATGCACAAGGTTGAGGCAGAATCGAGGTACCAGGTCGGGTGTAAAATACAAGGTGATACAGGTTCTGAGGGTCTCACAACTTGACAAGGTTGAGGCAGAATTGAGGTACCAGGTCGGGGGAAAAATACAAGATGATACAGGTTCTGAGGGTCTCACAGCTTGA 351 0.4387 MEYHVNKGEVLVETLENTSNWHIPILAMTADVIQATHKECLKCGMDGYVSKPFEAEQLYQEVSCTRLRQNRGTRSGVKYKVIQVLRVSQLDKVEAELRYQVGGKIQDDTGSEGLTA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0300 116 SUPERFAMILY CheY-like 9 62 IPR011006 -
Alju13g0300 116 Gene3D - 8 109 - -
Alju13g0300 116 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 60 - -
Alju13g0300 116 Pfam Response regulator receiver domain 10 62 IPR001789 GO:0000160
Alju13g0300 116 ProSiteProfiles Response regulatory domain profile. 1 66 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0300 Alju-ChrAlju13 7850967 7851835 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0300 1 63 Miscellaneous Gene Families AT1G27320 69.841 3.52e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju13g0300 Response_reg 3.1e-07 CL0304