Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0256 ATGGCGTGCAATGGATTATCAACAATCTCAGGAAGCGATTCTCGCTTCTTCAACCTCTCAACACCACCAATTTCGTCCACCAAATCCGTGAAATTTTCCTCGATTCGAGTTCCGTCGTCTAGTTCCGCTTCGTTCAAACCGAGAGCTCTGTCTGTCGCCGAGCCCTACTTCTCGTCGCCGTCGTCCTCTGAGCCCTCTAAATTGAGCTTCTACGAGCTTCTAGGCATCCCCGAATCTGGATCCTTACTCGACATCAAGCAAGCCTACAAGCAGCTCGCCCGCAAGTACCACCCGGATGTGTCTCCGCCGGGTCGGGCCGATGAGTTCACCAATACATTCATTCTGGTTCATGAAGCCTATGAGACCTTGTCTGATCCTCAACGGAGAGCTATGTACGATAGAGCCATTCACTTGGGCTACTCTGCTGGCGGAAGCTGCTACGACGATGAGATCACATTGAAACTCTGGTTTTCAATGGCTGAAATAAAGAAAGAATGGAAAGCTCGTTGGGAGGTTCAGCTAGCAGGGCTGAATAACAGAACTTACAAGTATGGCGATAGATCTCATTCATGGGCTTCTCAGGTCCGCCGGAAGCATAGTGAAGCTGGATTTTACAATTAG 621 0.496 MACNGLSTISGSDSRFFNLSTPPISSTKSVKFSSIRVPSSSSASFKPRALSVAEPYFSSPSSSEPSKLSFYELLGIPESGSLLDIKQAYKQLARKYHPDVSPPGRADEFTNTFILVHEAYETLSDPQRRAMYDRAIHLGYSAGGSCYDDEITLKLWFSMAEIKKEWKARWEVQLAGLNNRTYKYGDRSHSWASQVRRKHSEAGFYN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0256 206 CDD DnaJ 70 125 IPR001623 -
Alju13g0256 206 Gene3D DnaJ domain 58 149 IPR036869 -
Alju13g0256 206 SUPERFAMILY Chaperone J-domain 67 148 IPR036869 -
Alju13g0256 206 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Alju13g0256 206 PRINTS DnaJ domain signature 108 128 IPR001623 -
Alju13g0256 206 PRINTS DnaJ domain signature 71 89 IPR001623 -
Alju13g0256 206 PRINTS DnaJ domain signature 89 104 IPR001623 -
Alju13g0256 206 PRINTS DnaJ domain signature 128 147 IPR001623 -
Alju13g0256 206 Pfam DnaJ domain 70 133 IPR001623 -
Alju13g0256 206 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Alju13g0256 206 SMART dnaj_3 68 128 IPR001623 -
Alju13g0256 206 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 30 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0256 Alju-ChrAlju13 5971893 5973495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0256 61 133 C2H2 Transcription Factor Family AT1G74250 45.455 4.28e-08 50.8