Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0189 ATGTTCTCTCTTCTTCATCATCATCATCACCATTTTCTTTCATGCTTAATCCTTCTGATGTGTCTGGGCTTATTGGGATCAGAATTAGCAAATGCACAGTTTTATCAGAAAGTCGGAGATAAACTGGTCCCTTACTGGAAGATCACCGTCGACCCGGCTGGCACCGGCAACTTCACCACCATCCAAGAAGCAATAAACTCAGTTCCTTCCAACAACAACTATTGGGTTTCCATCTATATAAAGGCAGGAATATATAGGGAAAAAGTGAGGATTCCTGATGATAAGCCTTATATAGTGTTGAAAGGAGCAGGAAAGAAGAGAACTATTGTTGTTTGGGATGATCATGAACCAGTGGCAGAGAGTCCTACGTTTACGTTGCTGGCTGATAATGTTGTCGTCAAATGTTTGAGCTTTCGGAATTCATACAATAATCCAATTAACAGCAACCCAAGGAAAGCGGCGGTGGCAGCAATGGTGGCCGGAGACAAGGCTTCCTTCTACAGAGTTGGGTTCTTTGGTTTACAAGACACATTGTGGGATGATCAAGGAAGGCATTACTACAAACTTTGTACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCAGGTCAATCTATATTTGAGAGATGTTCCATATCAGTGATTGCAGGAGCCCTAGATGGGCTTCCAGGGTTTATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTTAAAGACTGCCATGTGTTTGGGAATGGCACAACTTACTTGGGAAGGCCTTGGAGAAGCTATGCAAGAGTTATCTTCTACAGAACCAATATGTCTCAAGTTGTTGAACCTGAGGGCTGGCAGCCTTGGAATTTTGCTACTAATGTGAAAAGGGTAACATTTGCAGAGTATGAGTGTTTTGGGCCTGGGTCCAACACTTCCCAACGAGTGAGCTGGTCCAAGTATAAGTTTGATTCCATGTATGTGGAGCAAATGGCTAATATGAGCTTCATTGATCCTGAAGGATGGCTTCAGAATCAACTTTTCTGA 1032 0.4244 MFSLLHHHHHHFLSCLILLMCLGLLGSELANAQFYQKVGDKLVPYWKITVDPAGTGNFTTIQEAINSVPSNNNYWVSIYIKAGIYREKVRIPDDKPYIVLKGAGKKRTIVVWDDHEPVAESPTFTLLADNVVVKCLSFRNSYNNPINSNPRKAAVAAMVAGDKASFYRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRSYARVIFYRTNMSQVVEPEGWQPWNFATNVKRVTFAEYECFGPGSNTSQRVSWSKYKFDSMYVEQMANMSFIDPEGWLQNQLF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0189 343 ProSitePatterns Pectinesterase signature 1. 72 91 IPR018040 -
Alju13g0189 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 339 - -
Alju13g0189 343 ProSitePatterns Pectinesterase signature 2. 192 201 IPR033131 -
Alju13g0189 343 Gene3D - 46 343 IPR012334 -
Alju13g0189 343 Pfam Pectinesterase 48 332 IPR000070 GO:0030599|GO:0042545
Alju13g0189 343 FunFam Pectinesterase 44 342 - -
Alju13g0189 343 SUPERFAMILY Pectin lyase-like 46 339 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0189 Alju-ChrAlju13 3774271 3778756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g0189 5 285 Carbohydrate Esterase AT2G19150 42.403 4.81e-78 239